| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0854 |
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| Symbol | rpsT |
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| ID | 8709411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 966502 |
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| End bp | 966762 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646482954 |
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| Product | ribosomal protein S20 |
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| Protein accession | YP_003374071 |
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| Protein GI | 283783317 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAAACA TTAAGTCGCA GAAAAAGCGT GTTCTCACTA ACGAGAAAGC ACATAAGCGT
AACGTAGCAG TAAAGTCTGC TTTGAAGACT GCTATTCGTG CTACTCGTGA AGCCATCACC
GCTGGTGATA AGGCTGCAGC GCAGGCCGCT TTCGCAGTAG CCGCTAAGAA GCTTGACAAG
GCTGCAGGTC GTGGCGTGAT TCATAAGAAT CAGGCTGCAA ACCGCAAGTC TGGTCTTGCT
GTAGCGATTA ACGCTCTGTG A
|
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| Protein sequence | MANIKSQKKR VLTNEKAHKR NVAVKSALKT AIRATREAIT AGDKAAAQAA FAVAAKKLDK
AAGRGVIHKN QAANRKSGLA VAINAL
|
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