| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0844 |
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| Symbol | |
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| ID | 8709272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 956129 |
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| End bp | 956872 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482944 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_003374061 |
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| Protein GI | 283783307 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAAGA GCGTCCTTGC AATGAAAAAT TGCGACCTGG CATACGGTTA TAAAACTGTA
GTGACTGGTA TTAATGGCAG TGTGCAAGCC GGGGAAGCTT TGGCTTTAAT AGGTCCAAAT
GGTTCTGGGA AAACAACGTT TTTGCAGGCT ATTATTGGTA TCGTGCGCGT AAGTCGCGGT
GAACTGAAAA TGCCTAAGGC TTTGTCTATT GGATATGTTC CACAGCAGGT TGATTTGGAT
TTAACGTTCC CGATTACTGC ACGGCAAGTT GTTGCAATGG GCTTAAGTAG ACAGACAGGT
TTTCTTGGAT TGCTTAAAAA AGATCAGAAA AAAGCTGTTG AGGATGCTCT TAATCATGTT
GGTTTATTCA ATCGCGCAGA TGTGCGATTT GGTGACCTTT CTGGCGGTCA GCGCCAGCGC
ATTCTTCTTG CGCGCGCGAT TGTTGCAAAG CCAACGCTTA TTTTGCTCGA CGAACCTTTT
AATGGTCTTG ATGAACCGAA TCGCCGAGAA CTTCTTAATA TTATGAAATC AGCAAAGCAA
GAAGGTATTG CTTTTGTTGT ATCTACGCAC GATTTAGTTA TTGCAGATGC TATTTGTGAA
AAAGCGCTAC TTTTAGCTGG CAAGCAGATT GCTTTTGGCG CGCTTAAAGA AGTAATGACT
AAAGAAAATA TTACTCGTGC ATATGGTGGA AGCATGCCTG CTGCTTCTGC AGGTCTTACT
TTTTCGGAAA TTGCGGAAGG CTGA
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| Protein sequence | MNKSVLAMKN CDLAYGYKTV VTGINGSVQA GEALALIGPN GSGKTTFLQA IIGIVRVSRG
ELKMPKALSI GYVPQQVDLD LTFPITARQV VAMGLSRQTG FLGLLKKDQK KAVEDALNHV
GLFNRADVRF GDLSGGQRQR ILLARAIVAK PTLILLDEPF NGLDEPNRRE LLNIMKSAKQ
EGIAFVVSTH DLVIADAICE KALLLAGKQI AFGALKEVMT KENITRAYGG SMPAASAGLT
FSEIAEG
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