| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0833 |
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| Symbol | |
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| ID | 8709184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 945316 |
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| End bp | 946689 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 646482933 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374050 |
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| Protein GI | 283783296 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAAA AGCTTAAGTC ATCCTTAATA AACATGTCTA AAGGTGTAAT AACTCCTGTT
ATTGTTATTT TTATTTTTTC TCTTACGATA GGTCTTTTCT TATCTCTCAC ACTTCTTGTG
GTTTCTATCG AAGAAGGAAC AGGTAATCTT TCTGAATCTG CAATGTCTAT GACTTGGGCT
GTGTTTATGT TTGCTCAAGG CGTGGGTCTT ACTTTTGGAA ATTGCATTCT TACGATTATT
CCTTTAGGCC TTACTTTTCT ACTTATTTCA ACGCTTGTAT GCTTAATTCG TCGTATTAAA
GGTGGGAATA TAGCATATTT TACTGGGCTT GTAGTCTGGG CTGCTATTAA TGCGATACTT
TCTCAAAATA CGCATGTTAC TTTACTTGAT TCTACTTTTA TTGTTGCTTG TAAATCTTCT
TGTGTTTATT TAATTTCGTT ACTTATAGCG GTTTTCCCAA GAAGCTCGCT GTTTGTATCT
GCTAAGCAGC GTTATAAGCA AATATGTCCT GAGTATATTC AAAAAAATAT TCGTATTACT
AAGCGAACTG CGGTAATTTT GTTCGGTTTA TATGCGTTTG TTGCGTTAAT AACTGTTGTG
GTTTGGGCTT GTACAAATTT TGGTTATGTT AATTCATATT TCAATAAACT AGGCATGCAA
AATGGTTCGC GTATTCTTAC AACTATTGCT TGCTTAGTTT GGTTGCCTAA TGTTGCTATT
TGGGCATTAT CTTGGATTTG TGGATCTGGA TTTAATATTG GATCTGTTGC ACAATTTACT
TTAACAGTTT CTCAACGTAA ATCTTTGCCG CCTATTCCGG TTTTTGGAAT ATTTCCTGAT
GCTGTTATTG ACGTTGTGCA TCGCACTGTT TTTTACTCTA TAGTTCCAAC TTTATGCTTT
ATTGTAATGT TTGTAGCTTT ATTGCATAAA AGCGGCTGTG GCTTGCGCCT AAAAAATATT
ATTGATAAAA CTGAGCGTGA GTCTTTTATG TTGAACGCTA TAGAAGCTGC AACTGATAGT
GTTGGCGTAT CCGCTTTAAT TACAATTATG TGGACTGTTG TTTTTTCAAT AGCAAATGGT
TCATTAGGGG AATGTCGACT TTCTTATATT GGAGTTGACA TTATTGAAAG TACTAGAGCT
GTTGGTCATC TTACTCTATA CGCTTCTGCT GTAGCATTGG TTATTTCAAT TTTTAGTATT
CTACTTATTT GTGGTGCGAG ATATTGCTTA AATCTTATTG CTGCTAGTAA GTCGAATAAA
CCTGTAAAAT TTGCAGAATT AATCGAAAAT AAGGCTAGTA ATAAAAATAA TCAACCTTTG
CCTTTGAAAA AAGCCGCTCC TAGGACGGTT TCATCGAAGG CTAAAAGAAA ATAA
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| Protein sequence | MVEKLKSSLI NMSKGVITPV IVIFIFSLTI GLFLSLTLLV VSIEEGTGNL SESAMSMTWA
VFMFAQGVGL TFGNCILTII PLGLTFLLIS TLVCLIRRIK GGNIAYFTGL VVWAAINAIL
SQNTHVTLLD STFIVACKSS CVYLISLLIA VFPRSSLFVS AKQRYKQICP EYIQKNIRIT
KRTAVILFGL YAFVALITVV VWACTNFGYV NSYFNKLGMQ NGSRILTTIA CLVWLPNVAI
WALSWICGSG FNIGSVAQFT LTVSQRKSLP PIPVFGIFPD AVIDVVHRTV FYSIVPTLCF
IVMFVALLHK SGCGLRLKNI IDKTERESFM LNAIEAATDS VGVSALITIM WTVVFSIANG
SLGECRLSYI GVDIIESTRA VGHLTLYASA VALVISIFSI LLICGARYCL NLIAASKSNK
PVKFAELIEN KASNKNNQPL PLKKAAPRTV SSKAKRK
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