| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0815 |
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| Symbol | uvrC |
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| ID | 8709052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 918567 |
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| End bp | 920909 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482916 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003374033 |
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| Protein GI | 283783279 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATA ATGATCTTAA TAAAAATTCT TATAAAGCAT ATGATTTGCA AGAAGAAAAT
AGGATGAGAG ATAGTGAAAA ATGGCGTAAA ACGCAAGCAA TAATAGATGA ACAGTTTTCG
AAAGATTCAT CATTTGATGA TGAAAGAGTA AATGCATTAG GAGCTCCATT GCTTGGTGAT
ACCCGTGATT TATTCCGTCC AGCTTCTCGT GATATTCCAG CGCAACCTGG AGTATACAAG
TGGCGTGATG GCGAGGGGCG AGTTATTTAC GTTGGAAAAG CAAAAAATTT ACGCAATCGT
TTAGCGAATT ATTTTCAACC TCTTTACCAA CTTCATCCTA GAACTCAATC TATGGTTCTT
ACAGCTCGCA GTTTGGAATG GACTGTTGTA AGCACTGAAT TTGAGGCTCT TACACTTGAA
TATACTTGGA TTAAAGCTTT TAATCCTAGG TTTAATGTAG TTTTTCGTGA CGATAAAACA
TATCCTTATG TTGCAGTTTC GCTAGAGGAA ACTTTTCCAA GAGTATGGAT TACTAGAAAT
CGTAGTGCGC GGCATGCTAG ATATTTTGGT CCGTATGCAA AAGTGTGGCC TCTTCGTCAT
AGTTTAGATT CTTTACTTAA AACTTTTCCT ATTCGCACAT GCTCATCCTC TGTTTTTAGC
AAAGCTCATA GGACTGGTAG ACCTTGCTTA TTTGCTTCGA TTGGTAAATG TTCAGCTCCT
TGTATAGGAA ACATAGATCC TAGCGAACAT CGCAAGATGG TAGAACATGT AGTTGGCATA
CTTACAGGCA GTGTTGGAGA GTCTTATATT TCACAAATTA AGAATGAGAT GAAAGAAGCA
AGTGAAGAGC TAGAATTTGA GCGTGCAGCT AAATTGCGTG ACGAAATTGC TGTTTTGAAC
ACTATTTTGC AACAAAATGC AGTTGTGTTT GACAATGATG TAGAAGCAGA TGTTTTTGGA
TTCTGCGGAG ATGAGCTTGA AGCGTCAATT CATGTATTTT TTGTCAGAGC TGGAATGATT
CGTGGAGAGA AAAATTGGTC GGTAGAACGA AATGAGCATA TCAGTGACAG TGATCTTATA
GCTGATTTAT TAACTCGCGT ATACGCAGAA TATGAGCAAA ATTACACACA AAACCATGAA
GATACTATTA GCATTAAGAA AGTTCGCGAC GCTGTTAGCT CTACGCAGCA AGCTACTGCA
ACTGATGTAA TATTGCGAGC GCAAGCTACT AAAACTCGTC GTGAACGTCA AGAGAGAACA
GGTCGTGAGG ATTTACTTGC TCCTATTTCG CCTGTTCCTC GTGAGATTAT AGTTCCAATT
AAAATTTCTG ATGAACGTAA GCAAGAGCTT GAATTGTGGC TTAGCAATAT TCGTGGTTCT
CAAGTAAGTA TTAGAGTTGC AGAGCGCGGA GAAAAACGTG CTCTTATGGA TCGTGCAAAC
GATAATGCTA GTCAGGAATT GAAACGAATA AAATCTAGCC GTATTAACAG CATAGATATG
AGAACAGAAG CTATGAACGA AATAGCAAAA GCGCTTGGAA TGAGTAAATC TCCTTTGCGA
ATTGAATGTT ATGATATTTC AAATACAGTT GATGGCAGTT ATCAAGTTGC TTCTATGGTT
GTTTTTGAAG ATGGTGTTGC TCGTCCTAGT GAGTACCGTC ATTTTGCGGT TCGAGGTGAA
CATGGTGATG GTAAAATAGA TGATTTAAGT GCTGTTTATG AAACATTATT GCGAAGGTTT
AAGCATAAAG ATGTTTATGC AGAAAATAGG CTTGATGCAT CAGATTCATC AGATACATCA
GATACATCTG ACTCATCTGA TATTAATATT TGCGATGCTA ACAGTATTTC TAATAAGCAT
TTTTCAGGTA ATTCATTGAC TAGTGCGCGG CATTTTGCTT ATAAACCTCA ATTAATTATT
GTCGATGGAG GAAAAGAACA AGCAAAAGCT GCTAAAAGAG CTATGAGAGA TGCTGGCGTA
AGTGATATTA CTGTTTGTGG TTTAGCTAAG AAGCTTGAAG AAGTGTGGCT TCCTGACGAA
GATTATCCAA TCATTTTTAA GAGAAGCTCA GAAGGATTGT ATTTATTGCA GCGTGCTAGA
GACGAGTCTC ATCGTTTTGC TATTTCGTAT CATCGTAAAT TGCGAAGAAA AGGTTCATTG
CATTCTACTT TTGATGCAAT TCCTGGAATT GGAGCAGTGT ATCGCAAGCG TTTGCTTGCA
TCTTTTGGTT CAATAAAATC TTTGAAAAAT GCTTCATTAG AAGATTTGCA AAAAGTACCT
GGAATTGGCG AGAATAAAGC AAAAGCTATA TACAGTGCTT TGCGTAAAAA TAATGATAAA
TAG
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| Protein sequence | MKDNDLNKNS YKAYDLQEEN RMRDSEKWRK TQAIIDEQFS KDSSFDDERV NALGAPLLGD
TRDLFRPASR DIPAQPGVYK WRDGEGRVIY VGKAKNLRNR LANYFQPLYQ LHPRTQSMVL
TARSLEWTVV STEFEALTLE YTWIKAFNPR FNVVFRDDKT YPYVAVSLEE TFPRVWITRN
RSARHARYFG PYAKVWPLRH SLDSLLKTFP IRTCSSSVFS KAHRTGRPCL FASIGKCSAP
CIGNIDPSEH RKMVEHVVGI LTGSVGESYI SQIKNEMKEA SEELEFERAA KLRDEIAVLN
TILQQNAVVF DNDVEADVFG FCGDELEASI HVFFVRAGMI RGEKNWSVER NEHISDSDLI
ADLLTRVYAE YEQNYTQNHE DTISIKKVRD AVSSTQQATA TDVILRAQAT KTRRERQERT
GREDLLAPIS PVPREIIVPI KISDERKQEL ELWLSNIRGS QVSIRVAERG EKRALMDRAN
DNASQELKRI KSSRINSIDM RTEAMNEIAK ALGMSKSPLR IECYDISNTV DGSYQVASMV
VFEDGVARPS EYRHFAVRGE HGDGKIDDLS AVYETLLRRF KHKDVYAENR LDASDSSDTS
DTSDSSDINI CDANSISNKH FSGNSLTSAR HFAYKPQLII VDGGKEQAKA AKRAMRDAGV
SDITVCGLAK KLEEVWLPDE DYPIIFKRSS EGLYLLQRAR DESHRFAISY HRKLRRKGSL
HSTFDAIPGI GAVYRKRLLA SFGSIKSLKN ASLEDLQKVP GIGENKAKAI YSALRKNNDK
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