| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0814 |
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| Symbol | |
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| ID | 8708945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 917369 |
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| End bp | 918499 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482915 |
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| Product | IMP dehydrogenase family protein |
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| Protein accession | YP_003374032 |
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| Protein GI | 283783278 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
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| TIGRFAM ID | [TIGR01304] IMP dehydrogenase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAGG AAATTGAAAT TGGTTTGGGC AAAAAAGCCC GAGTTGCATA TTCGCTTGAC
GATATTGCTA TTGTTCCTTC GCGCCGCTCG CGTGATCCTC AAGCTGTATC TACTTCATGG
CAAGTAGATG CTTACACGTT TGATATCCCA ATTATTGCTG CTCCGATGGA TTCTGTTACT
AGCCCGGATA CTGCGATTGC AATTGGTCAA ATGGGTGGTC TTGGAGTTCT TGATCTAGAA
GGTTTATGGA CTCGATATGA GAATCCAGAA CCTTTGTTAA AAGAAATAGC TGAGATGCCG
TCAAATATTG CAACCCGCCG CATTCAGGAG ATTTATACTG AGCCAATCAA ACCAGAATTG
ATTGCAAAGC GTTTGCATAC AATCAGAGAT GCTGGAGTGA CAGTAGCAGG AGCTCTTTCT
CCACAACGCA CGCAAGAATT ATATAACACT GTGCTAGAAG CTGGTGTTGA TTTATTTGTG
ATTCGCGGAA CAGCAGTATC TGCGGAACAT GTTTCTAAAG ATCATGAACC TCTTGATTTA
AAGAAGTTTA TTTACGATCT CGATGTCCCT GTTATTGTTG GAGGTTGCGC GGATTATACT
TCTGCTCTTC ATTTGATGAG AACTGGAGCT GCAGGTATTT TAGTCGGATT TGGCGGCGGA
GCAGTATCCG CAACAATGAA TACTTTAGGT GTGCAAGCAC CTATGGCTAC TGCCATTGCG
GATGTTGCTG AAGCTCGTAG GGATTATATG GATGAATCCG GCGGTCGTTA CGTGCAAATT
ATTGCTGATG GAGGAATGGG TAATTCCGGC AGCTTTATTA AGGCTCTTGC AGTTGGAGCT
GACGCAGTTA TGCTTGGTAC TCCATTAGCT CGCGCAACTG AGGCTCCTGG TCATGGCACT
CATTGGGGTG CTGAGGCTCG CCATTCATCA CTTCCTCGTG GCATGCGCTC AAATGTTGGC
ACTGTGGCTC CGTTAGAAAA TATTCTTTTC GGTCCAAGTC ATGAAGCAGA TGGTACTACA
AACTTTGTTG GTGCATTGCG CAGAACAATG GCTTCTACAG GTTATGTTGA TGTTAAGAGC
TTCCAGCGTT GCAACGTAGT ATTTAACCCA TTCCATCAGG ATATTCGTTA G
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| Protein sequence | MSQEIEIGLG KKARVAYSLD DIAIVPSRRS RDPQAVSTSW QVDAYTFDIP IIAAPMDSVT
SPDTAIAIGQ MGGLGVLDLE GLWTRYENPE PLLKEIAEMP SNIATRRIQE IYTEPIKPEL
IAKRLHTIRD AGVTVAGALS PQRTQELYNT VLEAGVDLFV IRGTAVSAEH VSKDHEPLDL
KKFIYDLDVP VIVGGCADYT SALHLMRTGA AGILVGFGGG AVSATMNTLG VQAPMATAIA
DVAEARRDYM DESGGRYVQI IADGGMGNSG SFIKALAVGA DAVMLGTPLA RATEAPGHGT
HWGAEARHSS LPRGMRSNVG TVAPLENILF GPSHEADGTT NFVGALRRTM ASTGYVDVKS
FQRCNVVFNP FHQDIR
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