| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0809 |
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| Symbol | rpsB |
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| ID | 8708855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 912403 |
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| End bp | 913221 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646482910 |
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| Product | ribosomal protein S2 |
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| Protein accession | YP_003374027 |
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| Protein GI | 283783273 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA TTACCATGAG CGAAATGCTG AAGGCTGGTT TGCACTTCGG TCATCAGACT
CGTCGCTGGA ACCCAAAGAT GAAGCAGTTC ATTCTTACCC AGCGCAATGG TATTCATATC
ATCAATTTGT TCAAGTCTCT CGACATGATC GACAAGGCTT ATGACTTCAT CAAGCAGACT
GTTGCTCACA ACGGCACTGT TCTCTTCGTG GGCACTAAGA AGCAGGCTCA GGAAGCTGTA
CAGAATCAGG CAACTCGCGT AAACATGCCT TATGTTTGCG AGCGTTGGCT TGGCGGTATG
TTGACCAATT TCCAGACTGT TTCTACTCGC GTAAAGCGCT TGAAGGAACT TGAGGAAATG
GACTTCAGCG ATGTTCGTGG ATCCGGCTTG ACTAAGAAGG AACTTTTGCT TCTCGAGCGC
GAGAAGGACA AGCTTTCCAA GCAGCTCGGT GGTATTCGCA ACATGAACCG CACTCCATCC
GCCATGTTCG TTGTTGATAT TAACAAGGAA GCTTTGGCTG TTGAAGAAGC CCATAAGCTT
GGTATTCCAG TTGTGGCAAT TGTTGATACC AACACTGATC CTGAGTCTGT TGAGTATCCA
ATTCCTGCTA ACGACGATGC TATTCGTGGC ATTGAGTTAT TGACCAGCTT GATGGCTGAT
GCTGTAGCTG AAGGCTTGCT TGAGCATGCC GGTAAGGGCG CTAAGTCTGA AGGTAATGAT
GCTCAGCCAA TGGCAGCTTG GGAGAAGGAA TTGCTCACCA AGGAAGGCGA AGCTGAAGCT
AAGCCTGCCA AGGAAGAAAA TACTGAGGCA AACGCCTGA
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| Protein sequence | MAQITMSEML KAGLHFGHQT RRWNPKMKQF ILTQRNGIHI INLFKSLDMI DKAYDFIKQT
VAHNGTVLFV GTKKQAQEAV QNQATRVNMP YVCERWLGGM LTNFQTVSTR VKRLKELEEM
DFSDVRGSGL TKKELLLLER EKDKLSKQLG GIRNMNRTPS AMFVVDINKE ALAVEEAHKL
GIPVVAIVDT NTDPESVEYP IPANDDAIRG IELLTSLMAD AVAEGLLEHA GKGAKSEGND
AQPMAAWEKE LLTKEGEAEA KPAKEENTEA NA
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