| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0804 |
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| Symbol | lgt |
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| ID | 8709135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 907927 |
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| End bp | 908844 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482905 |
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| Product | prolipoprotein diacylglyceryl transferase |
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| Protein accession | YP_003374022 |
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| Protein GI | 283783268 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase |
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| TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGTCT GTTTTATCCC GTCGCCAAGT ATTTCGCAAT TTTCTCTTGG CTTTGTAAAC
ATAAAGTTTT ACGCTCTTAG TATTCTTGCC GGTATTTTGG TTGCAATGTG GATTACTACG
CGTCGATGGA AGCGTCTTGG AGGAGATTTT AACCAGATAC TTGATCTTGT TTTAGTCAGT
CTTCCTGCTG GAATAATTGG CGCGCGTTTG TATCACGTTA TTACAACTCC AGAAAAGTTT
TTTGGCTCTA ATGGTGATTT TTTAGAAATT TTTAGAATTT GGAATGGTGG TCTAGGAATT
TGGGGTGGCA TATTCTTAGG CGCATTGGCT GCTTGTGTGC TATGCAAGTA TCGTAAATAT
CCTATTGGAT TACTAGCTGA TTGTGCAGCT CCTGCAGTGC TTATTGCTCA AGGTATAGGA
AGATTGGGGA ATTGGTTTAA TCAAGAACTT TACGGAGCTC CTACTAACTT GCCATGGGGT
TTGAAGTTAA ATTATGATAC CACTCAAGCA ATAGGTCATA GCGAAAGATG TTATGATGGG
TTAACGTGCC CAGAAGGCAC ATTATTCCAT CCGACATTTT TATACGAGAT GATTTGGAAT
TTCATCGGTG CTGCATTGCT TATTTATTTT GGCAAAGTTA TAGCTAAGAA ATTAAAAGCC
GGTTCCGTAT TCGCACTTTA TGTTATGTGG TACACAATCG GACGAGTATG GATTGAGGCA
TTGCGAATTG ATTTTTCACA TGTCTTCTTA GGTGTTCGCA TTAATGTTTG GGTTTCTATT
ATCGTATTTA TTTGTGCAAC TATTGTTTTT GCTTTGCTGC AAAAGAGTGC TAGTACTCGT
GATTCTCTTG TTGAACGACT TATAGATATA ACTTCAGATG AAAGAGAACG TGAGTCTCAG
AATACTTCTA GTAAATAA
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| Protein sequence | MTVCFIPSPS ISQFSLGFVN IKFYALSILA GILVAMWITT RRWKRLGGDF NQILDLVLVS
LPAGIIGARL YHVITTPEKF FGSNGDFLEI FRIWNGGLGI WGGIFLGALA ACVLCKYRKY
PIGLLADCAA PAVLIAQGIG RLGNWFNQEL YGAPTNLPWG LKLNYDTTQA IGHSERCYDG
LTCPEGTLFH PTFLYEMIWN FIGAALLIYF GKVIAKKLKA GSVFALYVMW YTIGRVWIEA
LRIDFSHVFL GVRINVWVSI IVFICATIVF ALLQKSASTR DSLVERLIDI TSDERERESQ
NTSSK
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