| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0801 |
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| Symbol | |
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| ID | 8709655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 905383 |
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| End bp | 906432 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482902 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374019 |
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| Protein GI | 283783265 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3879] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGC AAGATGAATT TGTTAGTTTA AAAGATAGTA TCAAAGATTT AGATGTAAAA
CATACGTCTC ATAAAAGCAC TATGCCAATG TCTTTTGCTG CTCCTGATGG AATGTTGTTA
ACTAGGCGTA GAGCATTATT CTCGCACTCA TTTACTGGTA TTTCAACGCA TCATGTTGTA
ATGTCTCCTA GTGGTTTTGC TCACAATCAT GATCGTAGAC GTTATATTGA CGATTATGCT
TTGCGTCTTA TTGATGATTT AACTAATCGT CCGGTTGATC CAATGTTTAT GGATGCAAGA
TTAAGTAAAC AACCTGTTAA ACCGTTTAAT CTGTGGTTCA CTAGAGCTAT AGTATTTTTA
TTGTGTGTTT CTATCGGTAC TGTTGGGAGC CAGTTTGTTC GTAAGTTACA CACTGATCCT
AGAAAAGCAA TACGTTCTTC ATTAGCTAAT GAGTTGTCAG GTTATACGTC TCGTTTCGAT
AAGCTTGTAG AAGAAGTAAC GTTATTGAGA AATAACGTAG ATCATGAGTC GCAAAAAATT
ACTACGCCTG AAGAGGATGA AGTTAGTAAA TCAGATGATA TGGTTAATGG CACTCATGCT
GTAGAAGGTT CTGGGATTAC TGTAACTATT GCTAATCCTA TTTCTGCTTC GAGCGATGTG
AATAGCGGTT CTTTGCCTCG CGAGAGTAAT GGCGCAAGAA TGCGATTAGT TACAGATCGC
GATATTCAAC AATTTGTATC ATTATTGTGG AAAGCAGGCG CTGAAGCTAT TTCTGTTAAT
GGGCATAGAC TTGGAGCACA AACTTCTATT CGTGTTGCTG GCCAAACTAT TCTTATTGGA
GTTAATCAAA CTCAAAGTCC ATATGTTATT GAAGTTATTG GCGATTCTGA TGATTTAATT
AAACAGTGTA ATGATATGAA ACGCATGAAA TGGTACGCAT CTTTAGCTAA TGCAGGCATT
AATCCACAGG TTTCACCTTC GAGAGTTATA CGACTCAGCG CAGCAAACAC AGGCGATATC
AGTTTTGCCA ACGAGAGAAT TAGGAGATAA
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| Protein sequence | MTKQDEFVSL KDSIKDLDVK HTSHKSTMPM SFAAPDGMLL TRRRALFSHS FTGISTHHVV
MSPSGFAHNH DRRRYIDDYA LRLIDDLTNR PVDPMFMDAR LSKQPVKPFN LWFTRAIVFL
LCVSIGTVGS QFVRKLHTDP RKAIRSSLAN ELSGYTSRFD KLVEEVTLLR NNVDHESQKI
TTPEEDEVSK SDDMVNGTHA VEGSGITVTI ANPISASSDV NSGSLPRESN GARMRLVTDR
DIQQFVSLLW KAGAEAISVN GHRLGAQTSI RVAGQTILIG VNQTQSPYVI EVIGDSDDLI
KQCNDMKRMK WYASLANAGI NPQVSPSRVI RLSAANTGDI SFANERIRR
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