| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0778 |
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| Symbol | thiG_1 |
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| ID | 8709693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 877194 |
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| End bp | 877973 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482879 |
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| Product | thiazole biosynthesis protein ThiG |
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| Protein accession | YP_003373997 |
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| Protein GI | 283783243 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2022] Uncharacterized enzyme of thiazole biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.312025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGGAAA TTATGGAGAA TGAAGATTAT TTAGAATTGG GCGGTAAGAA GTTTACTTCT
CGATACATTT TGGGTTCTGG AAAGTATTCT GAGGAGCTTA TTGATGCCGC AGTAAATAGT
GCTAAAGCTG AAATGATTAC TGTAGCAATT CGCTATAGCG AGAAAGCTGC AGGAATTTTA
AAGCATATTC CAGAAGGCGT TACCATTCTG CCTAATACTA GCGGATGCGT AACTGTAGAG
GAAGCAGTTA ACACTGCACA TATTGCTCGC GAAATGGGTT GCGGAAACTT CATCAAGCTT
GAGATTATTC CTGATCGCAA GTATTTGTTG CCAAACAATG AAGCTACTTT GCAAGCAACA
AAGATTTTGG CTGACGAAGG CTTTACTGTT CTTCCTTACA TGTATCCAGA TTTGTACTTT
GCTAAGGCAA TGCGCGACGC TGGAGCTGCT GCAATTATGC CTCTCGGCTC TTTGATTGGC
TCTAACAAGG GTCTTGAAAC TAAGAAGTTT ATTCAGCTTA TTATCGACGA AATCGATCTT
CCTGTTATTG TCGATGCCGG CATTGGCGTT CCAAGCCAGG CTGCTGAAGC AATGGAAATG
GGTGCTGCAG CTGTAATGGC AAATACTGGA GTTGCTACTG CAAACGATAT TGTGCTTATG
GCTAAAGCAT TCAAGCTTGG TATTGAAGCA GGCCGCGCAG CTTATCTTGC AGGCCCTGGT
CGAGTGCTTG AAAAAGGTGC AACACCATCT TCTCCAAAGC GCGATGACGA AAGCAAGTAA
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| Protein sequence | MEEIMENEDY LELGGKKFTS RYILGSGKYS EELIDAAVNS AKAEMITVAI RYSEKAAGIL
KHIPEGVTIL PNTSGCVTVE EAVNTAHIAR EMGCGNFIKL EIIPDRKYLL PNNEATLQAT
KILADEGFTV LPYMYPDLYF AKAMRDAGAA AIMPLGSLIG SNKGLETKKF IQLIIDEIDL
PVIVDAGIGV PSQAAEAMEM GAAAVMANTG VATANDIVLM AKAFKLGIEA GRAAYLAGPG
RVLEKGATPS SPKRDDESK
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