| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0757 |
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| Symbol | |
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| ID | 8709716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 857265 |
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| End bp | 858341 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 646482859 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373981 |
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| Protein GI | 283783227 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3328] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00822363 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTTTTA CAAGGAAACG TGAAGATATT ACACATGCAG CACAATTCAA TAAATTCATT
CATTGGATTA TGGGAAACCA GACTCAACGT GAAGCATGTC CTAGTGGTTC TGATAGAACA
TGGCGATATC GGATTGAATG GTGTTGGAAT GTTAAACCAG AATTACCCGA GACAGGCGAA
ATTTACGACT ATGTTCAAAT CGATGGAACA TATCTCCCAT ATGGGTGGTG TTTATTAACC
GCGGCAAGCA AGGGTAAAGT TATTGCTTTG CAATGGTGCA ATAGAGAAAA TACTGAAGCA
TATAAGAGTT TACTTAATAA TTTATTAGCT CCTACTGTTG TTGTTACTGA CGGGAATGCT
GGCGCGTTGA GCGCTATTAA ACAAGTTTGG CCAGAGACTC GAGTACAACG CTGTTTAGTA
CATATTAAAC GTAATATACG CGTATTAACT ACAAGCAAGC CTAGGCTACA ATCACATAAG
GCTTTGTGGG GTTTAGCTAA AAAGTTAGTT AAAATCAGAA CGTTGAAAGA ATCTGATTTA
TGGGTTAATT TACTACAGAA ATCTTATAAC CAGTGGAAAG ATTGGCTTAA CCAAAAAACG
TTCCGTAAGA ATGTCTCTGA AGAGAATATT CCTTCTTGGG TAAGAAGTAA TCAACAATGG
TGGTATACGC ACCAGAAAGC ACGAAAAGCT TATAATCTGC TTGCTAAACA AGTTAAAAAT
GGTACGCTAT TTACCTTTCT TGATCCTCTA CTATTAGAAA GCACTAGTGT TCCTATTCCT
AGTACTACGA ATGCTTTAGA AGGTGGTATA AATTCGCAGA TAAAGAAATT GGTAAGTATT
CATAAAGGGT TATCTGAAGA TCACATGCGT AGAGCTATAG AGTGGTGGTG TTACTTCAAT
AGTGAAAATC CTTCAGATCC TAAACAATTT ATAACTGCTG AATGTTTTAA ACCAAAAAAT
AAAAAAATTA TTATTGATAA TAATCCAATC GGACCAGCTC ATTTAGACAC TGGATTTGAC
TTATGTAAAT CTGACTATCA TCCAGATATT TCAATCAGAA AAGGGACAAT GCGTTAA
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| Protein sequence | MSFTRKREDI THAAQFNKFI HWIMGNQTQR EACPSGSDRT WRYRIEWCWN VKPELPETGE
IYDYVQIDGT YLPYGWCLLT AASKGKVIAL QWCNRENTEA YKSLLNNLLA PTVVVTDGNA
GALSAIKQVW PETRVQRCLV HIKRNIRVLT TSKPRLQSHK ALWGLAKKLV KIRTLKESDL
WVNLLQKSYN QWKDWLNQKT FRKNVSEENI PSWVRSNQQW WYTHQKARKA YNLLAKQVKN
GTLFTFLDPL LLESTSVPIP STTNALEGGI NSQIKKLVSI HKGLSEDHMR RAIEWWCYFN
SENPSDPKQF ITAECFKPKN KKIIIDNNPI GPAHLDTGFD LCKSDYHPDI SIRKGTMR
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