Gene HMPREF0424_0751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0751 
Symbol 
ID8709371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand+ 
Start bp851446 
End bp852000 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content37% 
IMG OID646482856 
Producthypothetical protein 
Protein accessionYP_003373978 
Protein GI283783224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones5 
Fosmid unclonability p-value0.0000385533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGATA AAATTAAACT AATTCATTTA CTTGATGCTA GGGCGGATCG TCTTTTATAT 
ACTTATCGCA CACAAGAAAA AGCTGCTGAT AGATGTGAAG CTTGGGAAAG ATGGCGCAAA 
AGATTCTCAA TTGGCTTAAC TGTCGTAATT ACAGGCACAC TGATTACAAG TGTTGCTGGT 
ATTATGTTAA ACGAAATTTG GGGGAATTTT GCAGTAGCAC TTATAGCGAC TTTAGCAACA 
GGTGCTTCTT TTTCGGGTGA ATTCTTTGAT TTTAAGGTAA AAATAGCAGA ACATCAAAAG 
TCCGCTGTTG AAATCCGCTA TCTATTTGAA AGATATGAAT CATTAATTTC TGATCTTGAA 
GTTTCAGCCA TTTCAAATGA GGACGCACGT AAAATTCGAG ATGAGCTAGA ACTTAAAGAA 
CACGACGTAC TATCAACAGC ACCTAGAACA ACATCCAGAG ATTATAACAA GGCTAATGCT 
GCTATAAACG GTAACGAAAA ACCCCAATCA TCACAAGAAG AAATTGATAA CAGAACCCCA 
GGAAGAATAG AATAA
 
Protein sequence
MEDKIKLIHL LDARADRLLY TYRTQEKAAD RCEAWERWRK RFSIGLTVVI TGTLITSVAG 
IMLNEIWGNF AVALIATLAT GASFSGEFFD FKVKIAEHQK SAVEIRYLFE RYESLISDLE 
VSAISNEDAR KIRDELELKE HDVLSTAPRT TSRDYNKANA AINGNEKPQS SQEEIDNRTP 
GRIE