| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0749 |
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| Symbol | |
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| ID | 8709421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 846353 |
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| End bp | 847360 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 646482854 |
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| Product | type II DNA modification methyltransferase family protein |
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| Protein accession | YP_003373976 |
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| Protein GI | 283783222 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000140331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTAAAT CAATTCTTGA TTATACTTTT GAGCAAAATG TTGATGAACA AACATTCTAT
GAGAAATATC CTAAGGTTTT CTCCACTTTA TTGTTAGATC ATACAACAAA ACGCAATATT
TGCTGGGCAA CGAATGATTA TAAAAATTAT GGTCATATTC ATCAAGCGCA TTCCGAAATA
ACCATTGCTT CAATTACTGG TAAATATGCA GGATTGATTG CACCTAGAAC ATCAAAATCT
CGTGAATTGC AAATATCTCG AACTAAAAAT AAGGCTGAGG TATTTACTCC ATCTTGGATT
TGCAATGAAC AAAATAATTT GGTTGATGAG GCATGGTTTG GCAGATCTAA TGTTTTTAAT
CGTACTAATG ACAAAAGTTG GATTTCTACC ACAGAAAAAA TTGAGTTTTC AGATAATCAC
TCAAAAAATT GGATGGCGTA TGTAGATGAA CGTCGAATGG AAATAACATG TGGAGAGGCT
CCATATTTAG TTAGCAGATA TGATGCAACA ACTGGCGAAA TAATTCCACT TAAGCAACGT
ATCGGACTTT TGGATCGTAA GCTTAGAGTA GTTAAAGAGA ATACTAGTAA TGAAATAGAT
TGGCTCAAGT GGTCTAAACG TGCATTTGAA TCTATATATG GTTTTGAATA TCAAGGAGAT
AGTTTGCTTC TAGCAAGAGA AAACCTTCTT GCAACATATG TTGATTATAT GCGTGATTCG
CTTAATAGAA AACCTACAGA ATCAGAGCTT TTAGGCATAG CAACTATTAT TTCTTGGAAC
ATCTGGCAAA TGGATGGACT TACAGGGTAT CCGCCTTATT GTAGTGAGAT ACATGCAAAT
ACTCAGCCAA CCTTATTTGA TTTTGAAGAA TTTGAAGAAT TTGAAGAGAA TGTAGATTCA
CAAACTTCAA CATCCTGCCA AATAAAAGAT TGGCGCACTA ATAAAACCAA CACATTTAAT
GACTTACTTT TACAGGAGAA AAACGATGGA ACAAGTAGAC AATCTTGA
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| Protein sequence | MSKSILDYTF EQNVDEQTFY EKYPKVFSTL LLDHTTKRNI CWATNDYKNY GHIHQAHSEI
TIASITGKYA GLIAPRTSKS RELQISRTKN KAEVFTPSWI CNEQNNLVDE AWFGRSNVFN
RTNDKSWIST TEKIEFSDNH SKNWMAYVDE RRMEITCGEA PYLVSRYDAT TGEIIPLKQR
IGLLDRKLRV VKENTSNEID WLKWSKRAFE SIYGFEYQGD SLLLARENLL ATYVDYMRDS
LNRKPTESEL LGIATIISWN IWQMDGLTGY PPYCSEIHAN TQPTLFDFEE FEEFEENVDS
QTSTSCQIKD WRTNKTNTFN DLLLQEKNDG TSRQS
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