| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0747 |
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| Symbol | |
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| ID | 8709555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 843988 |
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| End bp | 844302 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482852 |
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| Product | putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein |
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| Protein accession | YP_003373974 |
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| Protein GI | 283783220 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3077] DNA-damage-inducible protein J |
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| TIGRFAM ID | [TIGR02384] addiction module antitoxin, RelB/DinJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000814382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACAAACA CAAACGCTGT ATATGCAAGA ATAGATACAA ATCTTAAAGA AAACGCTGAA
AGCATATTGA ACCAGCTTGG AATAACTCCA TCTTCAGCAA TCCAAATGCT TTATAGTCAA
ATCGTTTTAC AAAAAGGCAT GCCATTTGAA CTTCGTCTGC CGACTAATAC ACAAGAAAAA
CCGCTTGCTT TAGGTAATTT AACTCGAGCC GAACTGGATG CAGAATTACA AAAAGGCATC
GATTCACTTT CGACTGGCAA ACAATATAGT GCAGATGAAG TAGAACAATT CTTCGCTAAG
GAATACGGCG TATGA
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| Protein sequence | MTNTNAVYAR IDTNLKENAE SILNQLGITP SSAIQMLYSQ IVLQKGMPFE LRLPTNTQEK
PLALGNLTRA ELDAELQKGI DSLSTGKQYS ADEVEQFFAK EYGV
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