| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0745 |
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| Symbol | |
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| ID | 8709750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 842056 |
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| End bp | 843393 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646482850 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373972 |
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| Protein GI | 283783218 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000175072 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGGC TGATTATGAG TAAACTTTTA GCATGGAAGA ACTCACCGTA TCGTAAACCA
TTGATATTAA AAGGCGTGCG TCAAGTTGGT AAAACTTGGA TACTAAAAGA ATTTGGTAAG
CTTTACTACA AAAATATTGC TTATTTTAAC TTCGATGAAA ACAAAGAATA TAAGCAATTC
TTTGAAACCA CTAAAAACGT GGAGCGAATT TTACAAAATC TAATGCTTGC AAGTGGTCAA
AAAATCGAAG CAGAAAACAC GTTGATTATA TTTGATGAGG TTCAGGATTG CCCAGAAGTA
ATAAACTCGA TGAAATATTT TTGTGAAAAC GCTCCGCAAT ATCATGTTGC TTGCGCTGGA
TCGTTGCTTG GAATAACACT TGCAAAACCA TCTTCATTCC CAGTTGGAAA AGTTAATTTT
ATGCAAATAA ACCCAATGAA TTTCACTGAG TTTTTACTTG CTAATGGAGA TGAAAATCTA
GCGAAGTATA TTAAACAAAT CGATAAAATA GAGCAGATTC CAGACGCATT TTTTAACCCT
CTATGCGAGA AATTAAAAAT GTATTATGTT ACAGGGGGAA TGCCTGAGTC AGTTTTAATG
TGGGCTAAAG CGCGAGATGT AAACGCAATG CAAGAAACGT TGTTTGAGAT CATAACAGCT
TATGAACGAG ATTTTGCGAA ACATCCTAGT GTTAGTGAGT TTCCTAAAAT ATCAATGATT
TGGAATTCTA TTCCGTCTCA ACTTGCGCGT GAAAACAAAA AATTCTTGTA TAAAGTTGTT
AAAAATGGTG CGCGAGCAAG AGAATATGAA GATGCTTTGC AATGGTTGGT GTCAGCACAA
TTGGTGTATA AAATTTATAG AAATACTGCG CCGAGTTTAC CTATTGCTGC TTATGATGAT
GTATCTGCTT TTAAGATTTA TTTGGCAGAT GTTGGTTTGT TAAGGCGATT ATCTCAACTT
GCTCCGACTG CGTTTGCGGA AGGCAATAGA CTGTTTACTG AGTTTAAGGG TGCTTTAACA
GAAAATTATG TTTTGCAAGC GCTGCTTACT CAATTTGAAG TGATGCCTAG ATACTGGTCT
CAAACGAATC CGCCGTATGA AGTGGATTTT CTTATTCAAC GAGAAAATGA TATTTTCCCT
ATTGAAGTTA AATCTGAAGC AAATATTAAT AGTAGAAGTT TGAAAAAGTT TAAAGAATTA
TTCCCTAATC AAACGAAATT ACGTATACGA TTCTCGCTGA ATAATCTCAA ACTAGACGAT
GATATGTTGA ATATTCCGTT ATTTATGGCT GATTACACGG ATAAGCTTAT AGAACTTGCT
CTGAAAGAGA ACGATTGA
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| Protein sequence | MKRLIMSKLL AWKNSPYRKP LILKGVRQVG KTWILKEFGK LYYKNIAYFN FDENKEYKQF
FETTKNVERI LQNLMLASGQ KIEAENTLII FDEVQDCPEV INSMKYFCEN APQYHVACAG
SLLGITLAKP SSFPVGKVNF MQINPMNFTE FLLANGDENL AKYIKQIDKI EQIPDAFFNP
LCEKLKMYYV TGGMPESVLM WAKARDVNAM QETLFEIITA YERDFAKHPS VSEFPKISMI
WNSIPSQLAR ENKKFLYKVV KNGARAREYE DALQWLVSAQ LVYKIYRNTA PSLPIAAYDD
VSAFKIYLAD VGLLRRLSQL APTAFAEGNR LFTEFKGALT ENYVLQALLT QFEVMPRYWS
QTNPPYEVDF LIQRENDIFP IEVKSEANIN SRSLKKFKEL FPNQTKLRIR FSLNNLKLDD
DMLNIPLFMA DYTDKLIELA LKEND
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