| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0723 |
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| Symbol | |
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| ID | 8709589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 819294 |
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| End bp | 820700 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646482828 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373950 |
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| Protein GI | 283783196 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.193357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGGAA TATTATTTAT GACTGATGAA GTGATGGATC CACAAGAACT AGCTAGAAGT
ATAGCTGTGG AAACTTCAGA ACGTACTGAT GCAGTAGGAG ATTTTGTATC TTCTATAGAG
CTTGGCAACG GAGTTACAGA CTTTCGTTTC GTAAGCAATT TAGTTGGGTA TGAAGGCTGG
CAGTGGTCAG TTACGTTGTA TCATGATGAA GAAACGCAAC GTTGGACCGT GAACGAATCA
ACGCTTGTTC CTACTGAAAA TTCTTTGCTT TCACCACCAT GGATTCCGTG GAAAGACCGC
TTGAAACCAA GTGATCTTTC TGTAATGGAC TCTATTGGCA CATCTGAAGA CGATTCTCGA
CTAGAAGATG GCTTCCGTCA AGTAAATAAT ATTGATGATA ATAATTCTGA AAAGAATATA
GAATCAGCAA ATTCAGATGA TTATTCTGAG TCTAAAACTG AAGATGACGC TAAAGCTAAT
ACTAGCGAAG AAGATGCAGA CACAAACGCA AACGCAGAAA AAGATATTAA TCAAAATCAA
GAATCTTGCG ATGCAAATAA TGATTTTGAC GAAGATCTTG AAGAAGCTGT TTCAACGCTA
AGACTGTCTC GCAGACGAGT AATGACTGCG GAAGCAATTT CGCAAACAGC TAAACGCTGG
TACGCAGGTC AACATGGCCC AAAGTCGTTA TCTACAAAAA TTGCCGATGG CAAAGCATGT
TCATCATGCG GATTCCTCAT TCCTCTAGCT GGAAGTTTAG GCTCTATGTT TGGCGTATGC
GCAAACATGT GGAGCCCAGA CGATGGGCGA GTTGTATCGC TTGATCATGC TTGTGGTGAG
CATTCTGACA TTGAACCACC TGAGCCATCG CAGCTTTGGA TTCAATCTGA GCCTGCATAC
GACGATTATC ATATTGACAT TTTGCAACAA GCTCCACGAG ATGAGCGAGC AGACGTTGAG
CTTATTGAGG AAGCAATCGA AGACAGTAAG ATGCATCGTC GTAAGCGCAG AAAATTAGAT
TCAAAATTGC GCAACAAAAG AGAAGTCTCA ACAGACAACG ATGAACAAAA TAATTTATCT
GAATCTGATT TAATAGACAA TTCAACTATT GGCGAAAAAT CATATGAAAA TAATGATGAC
AAAAATCGCG AAATTGAAGT TGAAAATCAA ACTGAAAAAA TTGAAGAGAC TGTAGCTAAT
GAATCTGAAA AATTTGAAAA ATCCCAAAAA GATACAGATT ATCCTGATTC TTCAGAAGTA
AACTTAGTAG ACGAAAATTC TGTTACAGAA GAAATACCGT TAACAGGAAA AGTGGAAGAG
TCACAAGAAT CTGAAGACAC TTCAAAAACT ACAGCATTCA CATCAATGCG ATTATATAAA
AGAAAATCTC GCAGACAACA TAAGTAA
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| Protein sequence | MSGILFMTDE VMDPQELARS IAVETSERTD AVGDFVSSIE LGNGVTDFRF VSNLVGYEGW
QWSVTLYHDE ETQRWTVNES TLVPTENSLL SPPWIPWKDR LKPSDLSVMD SIGTSEDDSR
LEDGFRQVNN IDDNNSEKNI ESANSDDYSE SKTEDDAKAN TSEEDADTNA NAEKDINQNQ
ESCDANNDFD EDLEEAVSTL RLSRRRVMTA EAISQTAKRW YAGQHGPKSL STKIADGKAC
SSCGFLIPLA GSLGSMFGVC ANMWSPDDGR VVSLDHACGE HSDIEPPEPS QLWIQSEPAY
DDYHIDILQQ APRDERADVE LIEEAIEDSK MHRRKRRKLD SKLRNKREVS TDNDEQNNLS
ESDLIDNSTI GEKSYENNDD KNREIEVENQ TEKIEETVAN ESEKFEKSQK DTDYPDSSEV
NLVDENSVTE EIPLTGKVEE SQESEDTSKT TAFTSMRLYK RKSRRQHK
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