| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0722 |
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| Symbol | |
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| ID | 8709727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 818905 |
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| End bp | 819294 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482827 |
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| Product | cold-shock DNA-binding domain protein |
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| Protein accession | YP_003373949 |
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| Protein GI | 283783195 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.155583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATG GGCGCGTGCG TTGGTACGAT ACGCAGAAGG GGTACGGCTT TATTGTTGGA
GATGATGGTA AGGATGTTTT CTTGCCAGCA GCAGCATTGC CAGTTACTGT AAAAAGTTTA
CACAAGGGTA CACGAGTTGA GTTTTCTGTA ATTGAAGGTC GCAAAGGACC ACAGGCTATG
GGCTTGAATG TTATTGCAAC AGCACCATCG CTTGTAAAGG CTACTCGTCC TAAAGCCGAA
GATATGGCAG CTATTGTAGA AGATCTTATT AAGCTTCTTG ATTCTGCTGG TAATGGTTTG
CGTCGACGTC ATTACCCATC AACTGCTGAA AGCAAAAAAC TTGCTACATT GTTGCGTGCA
GTGGCAGATA ATTTTGACGT TCAGGAATAG
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| Protein sequence | MPNGRVRWYD TQKGYGFIVG DDGKDVFLPA AALPVTVKSL HKGTRVEFSV IEGRKGPQAM
GLNVIATAPS LVKATRPKAE DMAAIVEDLI KLLDSAGNGL RRRHYPSTAE SKKLATLLRA
VADNFDVQE
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