| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0720 |
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| Symbol | |
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| ID | 8708950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 816024 |
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| End bp | 816764 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482825 |
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| Product | response regulator receiver domain protein |
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| Protein accession | YP_003373947 |
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| Protein GI | 283783193 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.351492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGA ACGTTGAAGC ATCTATTGTC GTGGTCGATG ACGAGCCATC AATCCGTGAA
CTTTTGGTAG CATCTTTGCA TTTTGCTGGG TTTGAAGTAG AAACTGCTGC ATCCGGCTCA
GAAGCTGTTG AAGTAATTGA ACGAGTAAAT CCAAATCTTA TCGTTATGGA TGTTATGCTC
CCAGATATTG ATGGTTTTAC TGTTACGAGG CGTATTCGTC AAAATGGAAT TAAAGTTCCT
GTATTGTTCC TAACTGCAAG AGACGATACA CAAGATAAAA TTATGGGTCT AACCGTTGGT
GGAGATGACT ACGTTACAAA GCCATTCAGC TTGGAAGAAG TAGTGGCAAG AATACGAGCA
ATTCTTCGCA GAACACAAGA ACCTGATGAA GAAACTCATA TTATAAAAGT TGCGGATCTT
GAGATTAACG AGGATTCTCA TGACGTAACT CGATGTGGCG TGCCAATCGA ACTTAGCCCA
ACTGAATACA AACTACTTCA TTATCTTATG GACAATGAAG GTCGAGTTCT GTCAAAAAGC
CAGATTTTGA ATCACGTATG GCAGTACGAT TGGGGCGGAG ACGCAGCAAT CGTTGAATCT
TATATTTCTT ATTTAAGAAA GAAGATTGAT GGCATTGAAA TTACTGATGA TTCAGGAAAA
CAGCAAAAAG TAGTTCCTCT TATTGAAACT AAACGTGGCA TCGGTTATAT GATTCGAGAG
CCTAAGGCAG GTCAAGCCTG A
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| Protein sequence | MSKNVEASIV VVDDEPSIRE LLVASLHFAG FEVETAASGS EAVEVIERVN PNLIVMDVML
PDIDGFTVTR RIRQNGIKVP VLFLTARDDT QDKIMGLTVG GDDYVTKPFS LEEVVARIRA
ILRRTQEPDE ETHIIKVADL EINEDSHDVT RCGVPIELSP TEYKLLHYLM DNEGRVLSKS
QILNHVWQYD WGGDAAIVES YISYLRKKID GIEITDDSGK QQKVVPLIET KRGIGYMIRE
PKAGQA
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