Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0718 |
Symbol | |
ID | 8708862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 814695 |
End bp | 814988 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646482823 |
Product | hypothetical protein |
Protein accession | YP_003373945 |
Protein GI | 283783191 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.423383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAT TTCGAGTTGA TTCAGAGCAA ATTCAGCAGG CTGCGGCAGC CGTTGGAACC TCGGTTAGTG CAATTAGAGA TGCAGTCAAC GGGATGTATA CCAATTTACA GCAATTGCAG AGCGTGTGGA CTGGATCGGC GGCTACACAA TTTGCGTCGA CCGCTCAGCA GTGGCGAGCG GCGCAACAAC AAATGGAACA ATCATTAGAA GCAATTCAGC AAGCTATGCA ACATGCGTCA GGAGTGTATC TTGATGCGGA AGCTCAAGCT ACTTCCCTAT TTGGAATGGG CTGA
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Protein sequence | MAQFRVDSEQ IQQAAAAVGT SVSAIRDAVN GMYTNLQQLQ SVWTGSAATQ FASTAQQWRA AQQQMEQSLE AIQQAMQHAS GVYLDAEAQA TSLFGMG
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