| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0703 |
|---|
| Symbol | dut |
|---|
| ID | 8709140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | + |
|---|
| Start bp | 796339 |
|---|
| End bp | 796818 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646482808 |
|---|
| Product | dUTP diphosphatase |
|---|
| Protein accession | YP_003373930 |
|---|
| Protein GI | 283783176 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0756] dUTPase |
|---|
| TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATATG ACGAGACCTA TACTGGCCCC GAACAGGTTG AGGTATTAAT TAAGTATCTC
GATGATGAAA CATCTACATT ACAGCCGCTT TACTACGCGC ATGCAGGTGA TGCAGGTGCC
GATTTAAGAA CTACCCAAGA TTTTACTTTG CGTCCTTTCC AGAGAGCGCT TGTTCCTACT
GGAGTTGCTA TAGCTTTACC TGCAGGTTAC GTTGCTTTAG TGCATCCTCG TTCTGGTTTA
GCAGCAAAAC AGGGTGTGAC TGTGCTAAAT GCACCTGGAA CAGTTGATGC CGGGTATCGT
GGTGAAATTA AGGTTCCTCT TATTAATTTA GATCCTGAGA ACACAGTGCA ATTCCATAAA
GGTGATCGTA TCGCTCAAAT GGTTATACAA CGTTATGTAG AAGCACAATT TATTCCCGCA
TCTAAATTAC CTGAATCTGA TCGCTCTGAT AAAGGTTTTG GCTCCACTGG CGTACAATAA
|
|---|
| Protein sequence | MAYDETYTGP EQVEVLIKYL DDETSTLQPL YYAHAGDAGA DLRTTQDFTL RPFQRALVPT
GVAIALPAGY VALVHPRSGL AAKQGVTVLN APGTVDAGYR GEIKVPLINL DPENTVQFHK
GDRIAQMVIQ RYVEAQFIPA SKLPESDRSD KGFGSTGVQ
|
|---|
| |