| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0701 |
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| Symbol | |
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| ID | 8708937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 794678 |
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| End bp | 795886 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482806 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373928 |
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| Protein GI | 283783174 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAA ATCCGCCAAA AGAGGCGAGT TTCGACCATA TTGACGCAGA CGGTAATTTG
ATTTTCATTT GTGAAAACAC GCCGTTACGT ATTCAAGTGG ACGACACGCT GGAACGCGCC
ATCGCTGGTT CACATAAAAT TACGAGTAAA AACAGCGATG AACATAACTC AGCAGATGCT
GGCACAAATT CTATGCAATC TAATGCAACA TTGCCTATTT CGCAAATTCA GGCATTGATT
CGCGCAGGAG TTGCACCTTC ACATGTGGCG CAAAGATACA ACGTTAGTGA AGCACAAGTT
AGGCGTTTTT CTGCAGGCGT TGAAACCGAA AAGCAGTATG CAATTGAGCA GTTCCTTCTA
GTACCTGCTC CTAAACAAAG CAATATGCGC ACTATTGCAG ATTTAATTGA AAGAACATTA
GCTAAAGCAC ATATTGGCAT GGAAACAGTG CAATGGAAAG CAACGCGCAG AGGATTAGAG
CCATGGCGAA TTACTGCTAC TTTCAAAACT GCTACTCGCA CTATTAAAGC TGAGTGGACA
TGGAACATGC ATGACAACTC TGTTACATGC GCGAACCCTT CGTCTAGATT ATTGCTTGGT
GAAGATGTTA ATGCAGCGGA TACTTCTAAA CAATCTCCAT ATGGTGGAGC TTATAGAGAC
ACTGTAAGCA TTAATTTCCC ATTCAACACT GAAGAGCTTC CAGGAAATTC TATTCGTTCT
GCCAGAATCG AACGAGCTGT TTCTCAATGG GAACTTAGAA ACAGTGACAA ACTTGCAGAT
GCACAAGCCC AATCTTCCTT CGAAAATCAG GACAATAATT CTGACATACA GCAAGTATTA
GAAAAAGGCT ATTCTAAGCG TTCTACTGAA ACAAATACGC AATTTATTAA AGAAGATAAT
CCTCAGCAGA CTTCGCTAAT ACAACCAGAT GCTGAATTTA TTAATAGAAA CGAAACGAAT
AGCAAAATCG TCAATGCGTC TAATGAAGCA CAAAAATCAT TGGCTGCGAA AGTTCAAAAT
GCTGAAAAAG CAGATATTGT TAGTACGAAT TTGCAAAAAA ATGCTGCTGA AAGTAATCAA
AATTCTGCTA AAAATAATCA AGAAATTAAT ACTAATGGCC AAGAAAAATC ATCTTCTGAG
CACAATAAAC GTAAAGCTGG AAGAGCAGCA GTACCAAGCT GGGATGAAAT ATTATTTGGC
GAAAGCTAA
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| Protein sequence | MLENPPKEAS FDHIDADGNL IFICENTPLR IQVDDTLERA IAGSHKITSK NSDEHNSADA
GTNSMQSNAT LPISQIQALI RAGVAPSHVA QRYNVSEAQV RRFSAGVETE KQYAIEQFLL
VPAPKQSNMR TIADLIERTL AKAHIGMETV QWKATRRGLE PWRITATFKT ATRTIKAEWT
WNMHDNSVTC ANPSSRLLLG EDVNAADTSK QSPYGGAYRD TVSINFPFNT EELPGNSIRS
ARIERAVSQW ELRNSDKLAD AQAQSSFENQ DNNSDIQQVL EKGYSKRSTE TNTQFIKEDN
PQQTSLIQPD AEFINRNETN SKIVNASNEA QKSLAAKVQN AEKADIVSTN LQKNAAESNQ
NSAKNNQEIN TNGQEKSSSE HNKRKAGRAA VPSWDEILFG ES
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