| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0698 |
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| Symbol | |
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| ID | 8709199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 788219 |
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| End bp | 790423 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482803 |
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| Product | phage prohead protease, HK97 family |
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| Protein accession | YP_003373925 |
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| Protein GI | 283783171 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02543] Listeria/Bacterioides repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGA GAACTGGTCT TATGTTGACT AGCACTATGA TGGGTATTGC TACTGCTGCT
TGTGCTTTCT GCATGGCGCA AAGTGCGAAT GCTGCCGAAA CTTCAGCTTC TTCTGGTGTT
AATACGACTG TAAATTCTTC TACAAATAAT TCTTCTACCA CAGCTTCTAA TACAGAAACT
TCCTCTACAG AAGGTTCTTC TTCCGTAACT TCTTATAACG CAGCTTCTAA TACGCCCAAT
GGGGGGGGGT CTGCTTTAGA TAGCACTTCC GCAAAACCTT CTGGAAATAC TGTACCTTCC
AAGTCTAGCG AAACTGCAAA AACTGCCGAA ACCACAAAAT CTACTAAATC TTCTAAAGCT
TCTGAATCTG TAACTGATGC TGAAAATTCT GAAAATGCTA GACTTACACA AACTCTTATA
GATGTAAGCA ATACTAATCT TCAAACAAAT AATCGTGAAG ATAGAAGCGT ACACGCATCT
GCAGAATCTA AAGCAGCATC AACTGATTCG GGTACTACAG ATGATGCATC TTTAACTTGG
ACGAAGGACG ACTTTAACAT TTCTGACGAT GGTAAAACTA TTGGAGGTAG GAAAAATGTT
TATTATCCGG AGACCGGTCA AACGGTAAAT GAGTATGTGG ACGGACTTAG TGCCAAAGGC
AAGGAGAAAC TTAAGAAAAA TCATCATGTT GTGATTCCTG AGGGTATTGA GGTAATTCAT
GAATGTGCTT TTACCGGTCA GGCTGACAAA GTCGGGAATA AGCATAAACA CGTTGACGGC
GAGACTTATA TTGAGGGTGT CACTCTTCCG CAATCTCTTA GAATAATAGA ATATGGAGCT
TTTGGTTGGA ATAAAATTAA AGGAACCGTT GTTATTCCAA AAAATGTGGT TTCAGTAAGC
GATGCAGCCT TTGTTGCTAA TGAAATTGAA AAAGTTGTGT TTGAAGGCGT GCTTGATGAT
AAGGGAAAAG AGCACGATAC AGATACTAAT CCGTATTATC TTGCTGGAGT TGGTAGTGTT
GCTTTCCAAG GTAATAAAAT TTCTGAAATT GTCGTAAAAG GTAATTTAGG ACAATATAAG
TTTCGCTCAG GGGAAAATGA TTCACCGTTT GACAATCAAA ATCCTGGACC TTTCACTATT
GAAGTGGGAG AGGAATACAA AAGTCCTATC AAAATTACGC AAGAAAGCGC TGGTCATACA
ATCAGTGTTA TGGAGGGTTT TGAGGAGAAT GGAAATCCTG TAACGATTGA CCTCTCACCA
TATTTTAAGA AAAATGCTGA TGGCAAATAT GTAGCTGTAA AAACTGGCAC ACTTGAAGGT
CAGTGCATTT TTTATGACTT TGTTCAGCGT GTGCCTAGGA TGATTGGTAG ATCGCGTTTT
ACATACAACA TTGTTCCTAA AGCTACGATT TACACAGTTA CTTTTGTAAA TGGCGCTAAT
TCTCATTATG CTTCTGTGCA AGTTAAGGAA GGCAAGAGCA TAAACGATAA GAGTGTTGAT
AGTCAGTCTA TGCCTAAAGA TCCTACGAAG ATTGGGTACA CTTTTGAAGG GTGGAATGAA
GATCAAGACG GTACTGGTGC AGTGTTCCTT GCCAGCACTA GTGTAAACAA AAATTTGAAA
GTTTACTCTA TTTTTAAGAA TTACTTACCA GTTATTACAG TTCAGAATAA GACTATTACT
GAGGGTGATT CACTCGATTT GAATAGTCTT GTTGTGTCTG TTAGTGATAT TGAGGATAAT
TCTATAGCAA CTAAGGTTAA GCGTATTAGT GACGGTGGTT TTAATAACAA TGTTCCAGGT
GTTTACACTA TCACGTTTAG CGTAACGGAC AATGGCGGTG CTACTGCAAC AGCAGTTGCA
ACAGTAACTG TTAATAAGAA GCCAACGCCT CTAATTCCAC CAGCTCCTGC GCCGGAACCG
GAGCTAACTC CAACTCCTGT TCCACTTCCT GAGTCGTCGG CCCCTGTCGC TCCAGGTCCG
ATTCTGACAC CCTCTGAGTC TGAGACAGAA CCTGAGTCAG CTCCAGCTCT TTCGCAACCC
GAGCAACCGG AAGCTAAGCG CGTTGTTAAG CATCTTCCTA AAACTGGCTC TTCAGTAGCT
ATGGTAATAA ATTATTTGTT TGCATCTGTG ACTGCAGGAA TTTTTGCACT TGTAGAAGCT
AGAAAATCAC TTCGCAGATA TTCCAAGCAT GCTCGCAAAA ACTAG
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| Protein sequence | MNKRTGLMLT STMMGIATAA CAFCMAQSAN AAETSASSGV NTTVNSSTNN SSTTASNTET
SSTEGSSSVT SYNAASNTPN GGGSALDSTS AKPSGNTVPS KSSETAKTAE TTKSTKSSKA
SESVTDAENS ENARLTQTLI DVSNTNLQTN NREDRSVHAS AESKAASTDS GTTDDASLTW
TKDDFNISDD GKTIGGRKNV YYPETGQTVN EYVDGLSAKG KEKLKKNHHV VIPEGIEVIH
ECAFTGQADK VGNKHKHVDG ETYIEGVTLP QSLRIIEYGA FGWNKIKGTV VIPKNVVSVS
DAAFVANEIE KVVFEGVLDD KGKEHDTDTN PYYLAGVGSV AFQGNKISEI VVKGNLGQYK
FRSGENDSPF DNQNPGPFTI EVGEEYKSPI KITQESAGHT ISVMEGFEEN GNPVTIDLSP
YFKKNADGKY VAVKTGTLEG QCIFYDFVQR VPRMIGRSRF TYNIVPKATI YTVTFVNGAN
SHYASVQVKE GKSINDKSVD SQSMPKDPTK IGYTFEGWNE DQDGTGAVFL ASTSVNKNLK
VYSIFKNYLP VITVQNKTIT EGDSLDLNSL VVSVSDIEDN SIATKVKRIS DGGFNNNVPG
VYTITFSVTD NGGATATAVA TVTVNKKPTP LIPPAPAPEP ELTPTPVPLP ESSAPVAPGP
ILTPSESETE PESAPALSQP EQPEAKRVVK HLPKTGSSVA MVINYLFASV TAGIFALVEA
RKSLRRYSKH ARKN
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