| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0655 |
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| Symbol | |
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| ID | 8708965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 736742 |
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| End bp | 737794 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482761 |
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| Product | NMT1/THI5-like protein |
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| Protein accession | YP_003373885 |
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| Protein GI | 283783131 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGC GTATTGTAAA GCGTACTCTT GCGTTTATTC TTTCTGCGTG CTGCGTATTT
TCTTTCTCGG CATGTGGATT TGCAAGTAGT AGTAAGAATG CAAATCTTCG TAAAGTGTCG
TTTATGCTAT TTTGGGCACC GGATACTAAT CATATTGGTA TTTATGTTGC TAAGCATAAA
GGATGGTTTA AAGATGCTGG ATTAGATGTC AATATACTTG CTGTTGCTCA GACTGGTTCG
GAACACGCAG TTGATAGTGG TGTTGCTGAT TTTGCTCTTA GTACTTTGAC AAATGCTGCT
GATTTTTCAA CAAAGGGAGC AAATCTTGAG CAAGTTATGC AAGTTCAGCA AAAGCCAAGT
GCTATTTGGT GTTCACTTGC TTCGAACAAT AAAATTCATT CTCCAAAAGA TTTTGATGGT
CGTACTTTTG CAACTTTTGG TTCAGCTGAA GGTGATGCTG TAATTCGTAG GATGATTCAA
CACGATGGTG GTCAAGGTAA GTTCGACAAA GTGACTGTTG GAACTTCAAC TTTTAGAACT
CTTGAATCTG GCAAAGCTGA TTTTGGTGGT TTTTACGGCA CTTGGGAAGG TGTACAGTCT
GAAATGTTTG GACCAAAGCT TCGCTGCTTC ATGGAGGGCG ACTACGGTGT ACCAGGTCAG
CCAGATACTA TTGGAATAAT CGCAAATAAG CGTACTGTAG CTAAAGACCC TAAGCTTGTT
CGAGCATTTG TTAAAGCTGC AAAGCGCGGA TATGAGTATG CTTATGAACA TCCTGATGAG
GCTTCTGAAA TTCTTGTGAA AGAAGCGAAA GATGCTAATC TCGACATAAA GTTTGTTCAG
CGTAGCATGA AGATGATTGT TGACGGTCAA TATTGGGGCA ATCGCGCGGA TATTAAGAGC
GGAAAATTTG TGTTCGGAAC CACTGATGTT AAAGGCGCTC AAGCTTACTT TAACTTCTTA
AGTAAGGAAG GTGCTTACAC TGATTCTAAA GGCAAAGTAA CTCATAAAAC TCCGCAAGCA
AAAGAATTGT CTACTGACGA ATTTTTGAAA TAA
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| Protein sequence | MNMRIVKRTL AFILSACCVF SFSACGFASS SKNANLRKVS FMLFWAPDTN HIGIYVAKHK
GWFKDAGLDV NILAVAQTGS EHAVDSGVAD FALSTLTNAA DFSTKGANLE QVMQVQQKPS
AIWCSLASNN KIHSPKDFDG RTFATFGSAE GDAVIRRMIQ HDGGQGKFDK VTVGTSTFRT
LESGKADFGG FYGTWEGVQS EMFGPKLRCF MEGDYGVPGQ PDTIGIIANK RTVAKDPKLV
RAFVKAAKRG YEYAYEHPDE ASEILVKEAK DANLDIKFVQ RSMKMIVDGQ YWGNRADIKS
GKFVFGTTDV KGAQAYFNFL SKEGAYTDSK GKVTHKTPQA KELSTDEFLK
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