| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0651 |
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| Symbol | |
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| ID | 8709007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 730176 |
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| End bp | 730541 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646482757 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373881 |
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| Protein GI | 283783127 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3189] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.249398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT GCACTGTGAA GATTAAGCGT GTGTATGAAA CGATTAGTGA AGATGATGGT
GTGAGAGTCT TGGTTGATAG ACTTTGGCCG CGTGGTATAA GCAAAGAATA TGCTCATATT
GATAAATGGC TTAAAGATAT TGCTCCTACT TCGCAGTTAC GCAAGTGGTT TAATCATGAC
CCGGAGCATT TTGAAGAATT TTCACATCGT TATGTTGAAG AACTTGATTC AAATCATGAA
GCTGTTGGTG TGATTATGGA TTTGTTTAAT AAGTATCAAA CTATAACTTT GTTGTATGCT
GCAAAAAATC CAAAAGTAAA TCACGCATTA GTTTTGCAAG AATATTTACA AAAATTACTT
GCTTGA
|
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| Protein sequence | MNKCTVKIKR VYETISEDDG VRVLVDRLWP RGISKEYAHI DKWLKDIAPT SQLRKWFNHD
PEHFEEFSHR YVEELDSNHE AVGVIMDLFN KYQTITLLYA AKNPKVNHAL VLQEYLQKLL
A
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