| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0640 |
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| Symbol | |
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| ID | 8709966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 713291 |
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| End bp | 714682 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482746 |
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| Product | O-acetylhomoserine aminocarboxypropyltransferase |
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| Protein accession | YP_003373870 |
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| Protein GI | 283783116 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
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| TIGRFAM ID | [TIGR01326] OAH/OAS sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.308078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGCGC AAAGTAAGCT GAAGCAAACT AATCTACTGT TTAAAAAGTC GCAAAACTGG
AGGGGTATTA TGAGCGATAT TGAAGAAACG CAAGGAAAGT ATCATTTTGA AACCTTGCAA
TTGCATGTTG GCCAAGAGCA GGCGGATCCG GCAACTGATT CTCGTGCAGT TCCTATTTAT
CAAACAACAA GCTACGTGTT CCATGATTTT GATCATGCTG CAGCTCGTTT TGATTTGCGT
GACGCTGGGA ACATTTATGG TCGTTTAACG AATTCTACTC AAGATGTTTT TGAGCGCAGA
ATTGCTGCTC TCGAAGGTGG AACTGCTGCT TTGGCTGTTG CTTCTGGCGC GGCCGCTGTA
GACTATGCTA TTCGTAACAT TACGCAGCAG GGCGATCATA TCGTGTCTTC AAAGAATGTG
TATGGCGGCA CTTATAACCT GCTTCGTCAC ACTCTTCCTA GAGATGGTGT AACAACCACT
TTTGTTGATC CTAAGAATCC TCAAAACTTC GAGGATGCTA TTCAACCAAA TACAAAGCTT
GTGTACTTTG AAACTTTTGG TAATCCTAAT GCTGATTTGC CTGATTTTGA GGCTATTTCA
GAGATTGCGC ATCGACACAA CATTCCTGTT TTTGTTGACA ACACTTTTGC AACTCCATAT
CTTTTCCGTC CGCTTGAGCA TGGTGCAGAT ATTATAGTTG AGTCTGCTAC GAAATTTATT
GGTGGTCATG GTACAACTCT TGGTGGCATT ATTGTTGAAG GCGGCAATTT TGATTGGGCT
AAAGTCCCTG GAAAATTCCC AACTCTTACA GAAGCTGACC CAAGTTACCA CGGTTTGAAC
TTCTATGAAG CTTTAGGACC TGTGGCTTTT GTGACGCGTA TTCGTGCGAT TATTTTGCGC
GATACTGGTG CTTGCATTAG CCCATTTGCA GCATTCTTGC TTTTGCAAGG CACGGAAACC
TTGAGCTTGC GTGTTGAGCG TCACGTTGAT AATGCGTTGA AGGTTGTTCA ATATTTGCAA
ACTGTGCCAG AGGTTGAATC TGTAAGTCAT CCTTCTATTG AAGGTCGTTC TGATCACGAG
CTTTATAAGC GTTACTTCCC GAATGGTGGA GGCTCTATTT TTACGTTTGA TATTAAAGGT
GGAAGGGATG CAGCTCGCGT ATTTATTGAC AATTTACAGC TTTTCTCATT GCTTGCAAAT
GTTGCGGACG TAAAATCATT GGTTATTCAT CCTGCATCTA CTACGCACTC TCAGGAAACT
CCTGAAGAAT TGGAAGATCA AGGCATTCAT GAAGGCACTA TTCGTTTGTC TATTGGAACT
GAACATATTG ACGATATTCT TGCTGATTTA CAGCGCGGGT TTGATGCAGT TCGTAAAGCA
GGACTTGCTT AA
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| Protein sequence | MDAQSKLKQT NLLFKKSQNW RGIMSDIEET QGKYHFETLQ LHVGQEQADP ATDSRAVPIY
QTTSYVFHDF DHAAARFDLR DAGNIYGRLT NSTQDVFERR IAALEGGTAA LAVASGAAAV
DYAIRNITQQ GDHIVSSKNV YGGTYNLLRH TLPRDGVTTT FVDPKNPQNF EDAIQPNTKL
VYFETFGNPN ADLPDFEAIS EIAHRHNIPV FVDNTFATPY LFRPLEHGAD IIVESATKFI
GGHGTTLGGI IVEGGNFDWA KVPGKFPTLT EADPSYHGLN FYEALGPVAF VTRIRAIILR
DTGACISPFA AFLLLQGTET LSLRVERHVD NALKVVQYLQ TVPEVESVSH PSIEGRSDHE
LYKRYFPNGG GSIFTFDIKG GRDAARVFID NLQLFSLLAN VADVKSLVIH PASTTHSQET
PEELEDQGIH EGTIRLSIGT EHIDDILADL QRGFDAVRKA GLA
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