| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0638 |
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| Symbol | |
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| ID | 8709553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 710848 |
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| End bp | 712491 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482744 |
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| Product | Mg chelatase-like protein |
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| Protein accession | YP_003373868 |
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| Protein GI | 283783114 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0606] Predicted ATPase with chaperone activity |
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| TIGRFAM ID | [TIGR00368] Mg chelatase-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.462995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATTG GAAACGCAAC GTCAATAGGG CTTATTGGTC TTAAAGCTTT TACTATTCAG
CTGCAAGCTT TTATATCTGG AAATATGCCA AACTTTTCTA TTATCGGCTT ACCTGACACT
TCATTAAGCG AAGCAAGAGA GCGCGTTAAA TCAGCTCATT TTGCGTTGCA TTGCAAATGG
CCTGAAGGAA GGGTAACAGT AAACTTATCA CCTGCTTCAA TGCCAAAAAG CGGAGCATCA
TACGATTTAG CTATCGCAGC AAGCATACTA AGCGCAGAAA AGTATATTCC ACTTACAGAA
TTAGAAAATA CAATTATTTT AGGAGAACTA AATCTTGACG GGACAGTATT ACCTATTCAA
GGCATTCTTC CTATTGCACT TTACGCAAAA AAGATGCATT TTAAACGAAT GATTATTCCA
CAAGAAAATC TTGCCGAAGC ACAACTTGTA GATGGAATTG AATCTATTGG AATACACCAT
ATTTTAGATT TAGTGACGCA ATTGCATGGC AGTTTGAGCG AGGAATCATT AAAGCTTATT
GAAGAAGACC CTGCGTATAA ACATATGCAA GTTCTTGAAC GAAATGGAAA TTATAACAAT
GGAGAAGAAG ATTATAATCC GTCAATTCAC GAAGAAAGCA CTTCCCCACT ACAAATTGAA
CCAAAACATG AAATTGGAGA TATGTCTGAA GTAATAGGGC AAGAACATAC AAAATGGGCT
CTACAAGTTG CTGCAGCTGG AGGACATCAC GTGATGATGA TTGGACCTCC AGGATCTGGA
AAAACCATGC TAGCTTCACG AATACCAAGC ATTATGTGTC CACTTAACGA ACAAGAACAG
CTTGAGGTTG CTTCAATTCG TTCACTTTGT GGCACACTTC CCTACTACGG AATTAGCAAT
ATTCCACCAT TTGAAGCACC TCACCATACT GCTTCAGCAG CTTCTCTTAT TGGAGGAGGA
ACAGGAGTTG CAAAACCTGG GATTATTACT AGAGCACATT GCGGAGTGCT GTTTATGGAT
GAGGCTCCAG AGTTTTCTCC TAGAGTATTG CAAACCCTAA GAGAACCATT GGAATCAGGG
CATATTGCTA TTTCTCGTTC AAAAGGGACA ACTCTTTATC CAGCTAAATT CCAGCTTGTT
GTTGCTGCAA ATCCTTGTCC TTGCGGATAC GCATACGGAA ATGGAGAACG ATGCACTTGC
AAAGAGCGCG AAAGAGCACG ATATTTTTCA CGCCTTTCAG GTCCAATTCT TGACCGTATC
GATATTCAAA TGGATGTGCC TCCAGTAGAA CGAATTATTA TTTCAAACCA TCATCACGAC
AATGCACAAA ACTCAGTTAA AAACACGTAT CTGAATAGCA AAACAATGCG AGATAACGTA
ATAGAAGCTC GTAAAATTGC TCGCGACCGT TTTATAAAAC AAGGCTGGGA TTGCAACGCA
CAAGCATCTG GAACATGGCT TAGAAAATAC ACTTCACAGC AAGCTGTAGG ACTTATCAAC
CGTGCATTAG AAAAGCATCA ACTGAGTTTG CGCGGAGCAG ATAGAGCATT GCGACTCGCG
TGGACGCTTG CTGATCTTTC TGGACACACT TCACCAGACA TGACAGACAT TGCACAAGCT
ATCAGTTTAA GGACACGAAT ATGA
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| Protein sequence | MHIGNATSIG LIGLKAFTIQ LQAFISGNMP NFSIIGLPDT SLSEARERVK SAHFALHCKW
PEGRVTVNLS PASMPKSGAS YDLAIAASIL SAEKYIPLTE LENTIILGEL NLDGTVLPIQ
GILPIALYAK KMHFKRMIIP QENLAEAQLV DGIESIGIHH ILDLVTQLHG SLSEESLKLI
EEDPAYKHMQ VLERNGNYNN GEEDYNPSIH EESTSPLQIE PKHEIGDMSE VIGQEHTKWA
LQVAAAGGHH VMMIGPPGSG KTMLASRIPS IMCPLNEQEQ LEVASIRSLC GTLPYYGISN
IPPFEAPHHT ASAASLIGGG TGVAKPGIIT RAHCGVLFMD EAPEFSPRVL QTLREPLESG
HIAISRSKGT TLYPAKFQLV VAANPCPCGY AYGNGERCTC KERERARYFS RLSGPILDRI
DIQMDVPPVE RIIISNHHHD NAQNSVKNTY LNSKTMRDNV IEARKIARDR FIKQGWDCNA
QASGTWLRKY TSQQAVGLIN RALEKHQLSL RGADRALRLA WTLADLSGHT SPDMTDIAQA
ISLRTRI
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