| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0626 |
|---|
| Symbol | guaA |
|---|
| ID | 8708867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | + |
|---|
| Start bp | 697516 |
|---|
| End bp | 699078 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646482735 |
|---|
| Product | GMP synthase (glutamine-hydrolyzing), C-terminal domain protein |
|---|
| Protein accession | YP_003373860 |
|---|
| Protein GI | 283783106 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0519] GMP synthase, PP-ATPase domain/subunit |
|---|
| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG GACCAGTGCT TGTCGTTGAT TTTGGCGCTC AATATGCTCA GCTTATTGCT
CGTCGAGTGC GCGAAGCAAA TGTGTATTCA GAACTTGTTC CTCACTCTAT GCCAGTTGAC
GAGATGCTTG CTAAGGATCC TCAAGCTATT ATTCTTTCAG GCGGTCCTGC TTCTGTTTAT
GAACCAGGTG CTCCTGACAT TGATCCAAAG ATTTTTGAAG CAGGTGTACC GGTTCTTGGT
ATTTGCTATG GCTTCCAGGT AATGGCTCAT GAGCTTGGTG GCGATGTCGA TAAAGCTGCA
CTTGGTGAGT ATGGCAAGAC TGCTGCAACT ATTGATGATT CTGAAGGTTT ACTTTCCGGA
TCTCCATCTG CGCAGAATAC TTGGATGAGT CACGGTGTTG CTGTTAAGCG TGCTCCAGAA
GGTTTTACGG TCTTGGCTCA CACAGAAGGT GCTCCAGTTG CAGCAATGCA AGACGAAAGT
CGCAAACTTT ACGGTGTGCA ATGGCATCCA GAAGTTAAAC ACACTCCATT GGGTCAGGAA
CTTATATCTA CATTCTTACA TAAGTGTGCA GGACTGAATA ATAATTGGAA TCCTTCTAAC
ATTATTGAGG ATCAAGTTGC TAAGATTCGC GCAGAAGTTG GGAATGCACA AGTTATTTGT
GGTCTTTCTG GTGGCGTAGA TTCTGCTGTT GCTGCAGCAT TGGTGCATAA AGCAATTGGC
AATCAGCTTA CTTGCGTTTT TGTTGACCAC GGTTTGCTTC GTAAAGGCGA AGTTGAGCAG
GTTAAGCATG ATTTTGTTGA AGCAACAGGC ATTAAACTTA TTGCAGTTGA TGCAGAAGAT
GACTTTTTGA ACGCACTTAA AGGCGTGAGT GAGCCGGAGC GCAAGCGCAA GATTATTGGC
GAAAAGTTTA TACGCACTTT TGAAAAAGCT CAGCGTCAAG TTATTGAAGA AGCTGGTAAA
ACTGGAGCTG AAGTTAAGTT CCTTGTGCAA GGCACACTTT ACCCGGATGT AGTTGAGTCC
GGTGGTGGTG ATGGTGCTGC AAATATCAAA TCTCATCACA ATGTTGGAGG TTTGCCAAAA
GATTTGAAGT TTAAGCTTAT TGAACCTTTG CGTACTTTGT TTAAGGATGA AGTTCGTGCT
ATTGGAACTG AGCTTGGACT TCCAGATGAA ATTGTTTGGC GTCAGCCATT CCCGGGTCCT
GGTTTAGGTA TTCGTATTGT GGGTGAGATT ACACGCGAAC GCTTAGCTGT TCTTCGTGAA
GCAGATGCTA TTGCGCGCGA AGAGCTCTCT AAAGCTGGAT TGGATCGCGA CATTTGGCAA
TGCCCAGTCG TTTTGCTTGC TGATGTTCAT TCTGTTGGTG TTCAAGGTGA TGAGCGCACA
TATGGTTCTC CAATTGTTTT GCGTCCTGTG AGCTCTGAGG ATGCCATGAC AGCTGATTGG
TCTCGTGTGC CTTACGATGT ATTGGCAAAT ATTTCTACTC GAATCACGAA TGAATGCCGT
CAAATTAATC GTGTAGTGCT CGACGTAACT TCTAAGCCAC CTGCCACGAT TGAATGGGAG
TAA
|
|---|
| Protein sequence | MAKGPVLVVD FGAQYAQLIA RRVREANVYS ELVPHSMPVD EMLAKDPQAI ILSGGPASVY
EPGAPDIDPK IFEAGVPVLG ICYGFQVMAH ELGGDVDKAA LGEYGKTAAT IDDSEGLLSG
SPSAQNTWMS HGVAVKRAPE GFTVLAHTEG APVAAMQDES RKLYGVQWHP EVKHTPLGQE
LISTFLHKCA GLNNNWNPSN IIEDQVAKIR AEVGNAQVIC GLSGGVDSAV AAALVHKAIG
NQLTCVFVDH GLLRKGEVEQ VKHDFVEATG IKLIAVDAED DFLNALKGVS EPERKRKIIG
EKFIRTFEKA QRQVIEEAGK TGAEVKFLVQ GTLYPDVVES GGGDGAANIK SHHNVGGLPK
DLKFKLIEPL RTLFKDEVRA IGTELGLPDE IVWRQPFPGP GLGIRIVGEI TRERLAVLRE
ADAIAREELS KAGLDRDIWQ CPVVLLADVH SVGVQGDERT YGSPIVLRPV SSEDAMTADW
SRVPYDVLAN ISTRITNECR QINRVVLDVT SKPPATIEWE
|
|---|
| |