| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0622 |
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| Symbol | aroA |
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| ID | 8710077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 689796 |
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| End bp | 691181 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482731 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_003373856 |
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| Protein GI | 283783102 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAATCG ATAGTATTCA TAGTATGAGT GATATTAACG ATATTGCAGA TTGCACTACT
CCTTGGAAAG CACCGTATGC TAATCATCAA TTAAAAGCTT ATATTGAGGT TCCTGGCAGT
AAATCTTTGT CGAATCGTTA TTTAATTTTG GCAGCTTTGG GCACAAAATC AGTAGTTTTA
CAAGGATTGT TGCGCTCGCG CGACACGGAG CTTATGATTA ACGCTTTATC TACATTTGGC
GTTAGATGTG AGTCATTAAA TGAAGATGGA ACTAAGCTTC GTGTAATTCC TCCAGAAGAC
GGAATTTTTA GGGTTCCAGA TAATGCTGAA GTGTATTGCG GTTTAGCTGG AACTGTAATG
CGTTTCGTTG CAGCTTTAGC TTTATTTGCA AATAAAGCTG TGCGATTTGA TGGCGATAAG
CAAGCTTATG CTCGTCCTAT GAAGCCAGTT CTTGACGGTT TAGAGCAGCT TGGTGCTCGC
GTAAAATATC ACGAAGAAGA GGGTTTTTTA CCTTTTACTA TTACGCCACC TTCAGTCGAA
TTTAAAATAA ATAATTTTTC TGAAAAAATC GTGCAAATTG ATTCTTCTTC ATCATCACAA
TTTATTTCTG CGCTGCTTCT GATTGGTTCA CGTATTCCTG GTGGATTAGA GCTTAAACAT
ATTGGTGACA CATTACCAAG TATGCCGCAT ATTCGCATGA CTATGGACGA TATTTGCAAA
GCGGGTGGGA TTGTAAATAT GACTAGCAAC GCAATGTGGC ATGTTAAAGA GAGCAAAATA
AATCTAGCTA ACGTTGTTAC TATAGAGCCT GATCTTTCTA ATGCTGCGCC ATTTTTAGGA
GCATCATTGA TTGCTGGAGG AAGTGTCAGT ATACCTAATT GGCCGTTTTC TTCAACTCAA
CCTGGAGGAT TGCTTCCTGG AATATTAGAG ACAATGTGCG CAAAAGTTAG TTTTGAAAAA
ACAAGCGATG ACGCTGGAAT AATGCATGTG GAAAGCGATG GTGCGATTAA AGCAATTCCG
TATCTTGATT TGAGCGCAGC AGGGGAGATT GCTCCTAGTA TTGCAGCTAT TCTTGCTTTT
GCGGACGGTC CAAGTGAACT TCATGGTATC GCGCATTTGA GAGGGCATGA AACGAATCGT
TTGCAAGCGT TAGTTAATGA ATTGAATCGA GTTGGGATTG GCGCTAAAGA GCTCGAAGAT
GGCATTCGTA TTGAGCCAAG TAATCATATG CATGGGGAAG TAATGGAAAC TTATGCGGAT
CACAGAATGG CAACTTTTGC TGCAATGCTT GGATTGCGCA TAGAAAATAT AAGAATCAAA
AATATTTCTA CTACTCGCAA AACGATTCCT GATTTTCCAG GCATGTGGCA TAAAATGCTT
GAATAA
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| Protein sequence | MLIDSIHSMS DINDIADCTT PWKAPYANHQ LKAYIEVPGS KSLSNRYLIL AALGTKSVVL
QGLLRSRDTE LMINALSTFG VRCESLNEDG TKLRVIPPED GIFRVPDNAE VYCGLAGTVM
RFVAALALFA NKAVRFDGDK QAYARPMKPV LDGLEQLGAR VKYHEEEGFL PFTITPPSVE
FKINNFSEKI VQIDSSSSSQ FISALLLIGS RIPGGLELKH IGDTLPSMPH IRMTMDDICK
AGGIVNMTSN AMWHVKESKI NLANVVTIEP DLSNAAPFLG ASLIAGGSVS IPNWPFSSTQ
PGGLLPGILE TMCAKVSFEK TSDDAGIMHV ESDGAIKAIP YLDLSAAGEI APSIAAILAF
ADGPSELHGI AHLRGHETNR LQALVNELNR VGIGAKELED GIRIEPSNHM HGEVMETYAD
HRMATFAAML GLRIENIRIK NISTTRKTIP DFPGMWHKML E
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