| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0594 |
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| Symbol | |
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| ID | 8709842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 651749 |
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| End bp | 652924 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 646482704 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_003373831 |
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| Protein GI | 283783077 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATTAG AAAATAAAAT AGATAATGCT AATTCTGAGC AATATAAAAA TACTAAACAA
CGTAATTTAT TAAATAAAAA CTCAAATGCT CAACTTAAAA ATAAGTCAAA AATGCGATTT
ACGAATTCTT CTGTAAAGCA TAATTATCCA AATCGACCTG TCGGATTTTT TTCATCTCTA
AAAATTGAAC TTTCGGCAAT TATTGTTTTT GCAACAGCAA TTGCTTTCGT AATGGCATGG
TTTTTACTTA AAACTGGTCT AAATGGCTGG ATTGCAATGC CATTAACACT TATTGTTGCT
CTGGGAATTA CATACATTTT TTCTAGAGGA CTTACAGCAC CACTTCGTCA AATGAAAAAT
GCTGCAGAAG CTATGGCTGA CGGCGACTAT TCTGTGCGAG TTGCTGTAGA AAATCGTCGT
GACGAAGTAG GTAAATTAAC TCTTGCATTT AATGAAATGG CAGAAGAACT TGAACATGCA
GATCAAATGC GTAGAGAGCT TATAGCAAAC GTAAGTCACG AACTGCGCAC TCCTGTTTCT
GCTTTACAAG CGATGCTTGA AAATCTTGCA GACGGAGTTG TTGATCCTAC TCCATCTAAT
ATGGAAGCTA TATTAAACCA AACTCATAGA CTTGCTGATC TTATTACTTT CCTTCTTGAT
TTATCTAGAG TTGAAGCAGG CGCGGAAAGC CTTAATATAA CTTCATTTAA TTTCACAGAC
TTTATTGACG AAATTATCGA ACCACTAGAA ATAGCTGATT CAGGTCATAA TCATAATATT
GAAGTTCAAA TTAATGATGA GATTGAATTA ACAGGAGATC AAGCTCGCCT TTCGCAACTT
TTTACTAATA TTATTTCTAA CGCTCTAAAA CATTCAGACG ATGGAACTCG TGTTCTTATA
AGTGCTCATA TTAATCACAG CCAAAACTCT GTAATATGCA ATGTTGTGAA TTTCGGAGAA
CAAATTCCTC AAGAAGATCG CGCCGATATT TTCAGAAGAT TTGTTAAAGG AAATCAGCGA
ATTGGCACAG AATCAGGAGG AACAGGATTA GGATTATCAA TTGCTCGTTG GGCTGCACAA
TTGCACCATG GAACTGTAAA AGTAGTAGAC GATAAACGCG GTCCGAACTT TGAAATTGCG
CTTCCGCTAA ACTATAGCAA TACAATAGCA AACTAA
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| Protein sequence | MVLENKIDNA NSEQYKNTKQ RNLLNKNSNA QLKNKSKMRF TNSSVKHNYP NRPVGFFSSL
KIELSAIIVF ATAIAFVMAW FLLKTGLNGW IAMPLTLIVA LGITYIFSRG LTAPLRQMKN
AAEAMADGDY SVRVAVENRR DEVGKLTLAF NEMAEELEHA DQMRRELIAN VSHELRTPVS
ALQAMLENLA DGVVDPTPSN MEAILNQTHR LADLITFLLD LSRVEAGAES LNITSFNFTD
FIDEIIEPLE IADSGHNHNI EVQINDEIEL TGDQARLSQL FTNIISNALK HSDDGTRVLI
SAHINHSQNS VICNVVNFGE QIPQEDRADI FRRFVKGNQR IGTESGGTGL GLSIARWAAQ
LHHGTVKVVD DKRGPNFEIA LPLNYSNTIA N
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