| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0593 |
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| Symbol | |
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| ID | 8709104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 649946 |
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| End bp | 650767 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 646482702 |
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| Product | eukaryotic phosphomannomutase |
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| Protein accession | YP_003373829 |
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| Protein GI | 283783075 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAC CAATAGTGCA TGATTGGAAT GAGTTTAATC TTGACTTGAG CATTGCTAAA
TCGTCTCTTA TTGCTTTTGA TTTAGATAAC ACACTGGCAT GTTCTAAAAA ACCTATGCTT
AAATCGATGG CTGAATCATT AAGTAAGCTG ATTGATATAA TTCCTGTTGC TGTAATAACA
GGTGGCTGCT TAGAGTTAGT TAAGAAGCAA ATTTTAAATA TGCTAACTAT TGGCACTAAT
CTTAAAAATA TTCACATAAT GCCCACTAAT GGAACTAGTT ATTATCGTGT GAATAATGAC
ATGTCATTGC AATCTGTTTA TGAACATACT ATCGATTTTA AGCAAGCGCA ATGCGTTATT
GATGCAATAC ACAAGTGTGC AAAAAATATA GGCGTTTGGA AAGAACCCGG CGATCCAATG
CTGTGGGGAG AACAGATAGA GAACCGCGGT AGTCAAATTA CTTTTTCGGC ACTAGGACAA
CTAGCTCCTA TTGAATATAA AAAAACTTGG GATCCTAGCG GTTGTTTGAA AGCTCAACTT
GCACAAAGCA TTTCTCAAGC TTTACCTAAT TTTGCTGTAC GCGCTGGAGG AGATACTAGC
ATCGATATAT ACAGGCGCGG TGACGATAAA GCTCAAGCTT TGCGAATGCT GTCTCAATAT
TGTGATGTTA ATATTGAAAA AATTACTTTT ATTGGCGATC GTATGTATCC TGGAGGAAAC
GATTATCCTA CTGCCTTTAC AGGAGCTTTA ATTATTAAAG TAAGTAATCC TTCGGATACT
TTAGAGCTTT GTAATAAGGT ACTTAATATT TTAGAAATAT AG
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| Protein sequence | MLKPIVHDWN EFNLDLSIAK SSLIAFDLDN TLACSKKPML KSMAESLSKL IDIIPVAVIT
GGCLELVKKQ ILNMLTIGTN LKNIHIMPTN GTSYYRVNND MSLQSVYEHT IDFKQAQCVI
DAIHKCAKNI GVWKEPGDPM LWGEQIENRG SQITFSALGQ LAPIEYKKTW DPSGCLKAQL
AQSISQALPN FAVRAGGDTS IDIYRRGDDK AQALRMLSQY CDVNIEKITF IGDRMYPGGN
DYPTAFTGAL IIKVSNPSDT LELCNKVLNI LEI
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