| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0579 |
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| Symbol | |
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| ID | 8709065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 626604 |
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| End bp | 627530 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646482688 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373815 |
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| Protein GI | 283783061 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.404895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCAGA GAAGAAAGAA ACATGATTCT ATTCATGTCA ACCTAAATAG TGGACATAAT
AGTGGTGCTC ATCACAATAA AAACAACAGT TCATTAAAGC ATAAGTTTTA CTCCAATAAA
ATTTTACGAA ACATTATTAT TGCTGTCATA GGCATTGCTA TTATCATTCC TGTTGTTCAG
TGGATACGTT GGGAACAGAC TGTTTCTAAT CTTCGCAACA AACAAGAACA ACTTGTGTCA
CGCTTCGATT TTAATCCAGG CAATATTATT TCTGATTCTC AATTTTTTGA CGATAACGCA
ATGAGTAAAG ACGAAGTACG CAATTTTATA CGCAAAAAAG GAGCAAAATG CACTGGTAAA
AATTGCTTAA AAAATGCGTA CTTTAATACT CACACTATTC CTGCCGATTC ACTATGCTCA
AAGTATCAAA GTGTAAGCAA AGAATCTTCT GCAGACATAA TATACAAATC AGCAAAAGCA
TGTCATATCA GTCAACGAGT ATTACTTACC ATGCTGCAAA AAGAACAACA TCTTGTAACA
GACACTGATC CTAGCGATTT CCAATACAAA TCAGCTATGG GATTAGATTG TCCAGATGAT
TCTCATTGCA ACCCACGTTT TGCAGGATTC TTTAAACAAG TAATTGGTTC CGCAAGAAGA
TATAGATATT ATCTTCTTCA TAACGATCAA TATAACTACC ACCCTAACAC GATTAACACA
ATTCAATATT CGCCAAATAA ATCATGCGGA TCTAGCAATG TTTATATCGA AAATAAGGCT
ACTGCATTAC TTTATATCTA TACTCCTTAT CAGCCAAATA TAGAATCGTT AAAAGCTGGA
TACGGCGAAG GAAATTCGTG CTCAGCATAT GGAAATCGCA ATTTTTCATT GATTTATTCT
GCATGGTTCG GAGATCCTCG CAAATAA
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| Protein sequence | MVQRRKKHDS IHVNLNSGHN SGAHHNKNNS SLKHKFYSNK ILRNIIIAVI GIAIIIPVVQ
WIRWEQTVSN LRNKQEQLVS RFDFNPGNII SDSQFFDDNA MSKDEVRNFI RKKGAKCTGK
NCLKNAYFNT HTIPADSLCS KYQSVSKESS ADIIYKSAKA CHISQRVLLT MLQKEQHLVT
DTDPSDFQYK SAMGLDCPDD SHCNPRFAGF FKQVIGSARR YRYYLLHNDQ YNYHPNTINT
IQYSPNKSCG SSNVYIENKA TALLYIYTPY QPNIESLKAG YGEGNSCSAY GNRNFSLIYS
AWFGDPRK
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