| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0570 |
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| Symbol | |
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| ID | 8709296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 617969 |
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| End bp | 618376 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646482679 |
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| Product | peptidyl-prolyl cis-trans isomerase, FKBP-type |
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| Protein accession | YP_003373806 |
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| Protein GI | 283783052 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0427302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAAG ATATGCCAGA AGTGATTGCA GAATTTGGCA CTACGCCAAC GGTGACGTTC
CCTGAATCTG AACCGCCAGC AGGCCTTAAA GTTGTTGAAT TAGTTGAAGG TAATGGTCCT
GTAGTTCGTG CAGGTGACAC TGTAACTGTG AATTATCATG GTGTGGTTTG GGGTAGCGAC
AAGCCATTTG ATTCAAGCTT TGCTCGTCAT ACTCCAGCTA GTTTTGGTAT TGGTGTCGGT
CAAGTGATTC AGGGCTGGGA TCGTACTGTT CCAGGTCATA ATGTTGGATC TCGTTTGTTG
ATTTCTATTC CTCCAGAGTA TGGTTATGGC TCTCGTGGCA TACCGCAAGC CGGTATTGGC
GGCGGAGACA CGTTGGTATT TGTTGTTGAT ATTATTTCAA CTCGTTGA
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| Protein sequence | MAQDMPEVIA EFGTTPTVTF PESEPPAGLK VVELVEGNGP VVRAGDTVTV NYHGVVWGSD
KPFDSSFARH TPASFGIGVG QVIQGWDRTV PGHNVGSRLL ISIPPEYGYG SRGIPQAGIG
GGDTLVFVVD IISTR
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