| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0563 |
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| Symbol | |
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| ID | 8709483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 609846 |
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| End bp | 610451 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482673 |
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| Product | putative pyroglutamyl-peptidase I |
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| Protein accession | YP_003373800 |
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| Protein GI | 283783046 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
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| TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00265713 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTATTT TGATTACTGG TTTTACGCCA TTTGATAATG AGTCTATAAA TCCGTCGTGG
GAGATTGCGC AATCAGTGCA TGCGCCTGAG GGTGTGGAAC TTGTTCGTTT ACATATCCCT
ACGGAATTTA ACAAGGGTGC GCAAGAAGTT ATTGAAAAAA TAGAGGAAGT TCACCCTAAT
GCCGTGCTTT CGTTAGGACA ATTTGGTGGT TCTGCTTGTT TTAACGTTGA GTATGTTGGC
ATTAACTGTA GAGCTGCGCG TATACCAGAT AATAGTGGAT ATAAACCTTG GTATGAGCCT
GTTGTGCAGG ATGGTGATGT GGCTTATAAA GCGACTTTGC CAGTTATAAA TATAGTTGAG
GCTTTGAATA AGGCGAAATT GCCGGCGTCT GTGTCTTTTT CTGCGGGCGC GTACGTGTGC
AATGATGTGC TTTACAGTGT TTGTTATTAT TGCCATACTA GGAAATTGCC GATTAAGAGC
GGTTTTATTC ACGTTCCGTA TTTGCCTGAG CAAGTTCTTG ATAAGCCGAG TACGAGTTCC
ATGAGTTTAG CTGATATGCT TCGAGGTATT GAAGTTGCAT TGCAAGTAAT TGCGGATGAT
TGCTAA
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| Protein sequence | MRILITGFTP FDNESINPSW EIAQSVHAPE GVELVRLHIP TEFNKGAQEV IEKIEEVHPN
AVLSLGQFGG SACFNVEYVG INCRAARIPD NSGYKPWYEP VVQDGDVAYK ATLPVINIVE
ALNKAKLPAS VSFSAGAYVC NDVLYSVCYY CHTRKLPIKS GFIHVPYLPE QVLDKPSTSS
MSLADMLRGI EVALQVIADD C
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