| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0562 |
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| Symbol | |
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| ID | 8709316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 608171 |
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| End bp | 609511 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482672 |
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| Product | pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_003373799 |
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| Protein GI | 283783045 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0012401 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGAAGA TCATTCAGAT TGGCGCAAAT CATGCCGGCA CTGCCTGCGC TAACACAATT
TTGAGCTACC CAGGAAACGA GCTTACCATT TACGATCAGA ATAGCAATAT TTCCTTCCTT
GGCTGCGGCA TGGCTTTGTG GATTGGCAAG CAAATTCAAA GCAGCGACGG ACTGTTCTAC
CAGAAGCCAG AAGATTTTGT TAAAAAAGGC GCTAAGGTAA ATCTTGAAAG TAAAGTTTTA
GACATTGATT ACGCAAAGAA AGAAGTAACA GTCGAGCTTA AAGACGGCAC TGTTATTCAC
GATTCTTACG ACAAGCTGGT TCTTGCCACC GGCAGCCTTC CAAACAAGCC GCGTATTAAA
GGCATCGACT TGGAAAACGT GCAAATGGTA AAGCTTTTCC AGAATGCTCA AACTGTTATT
GCTAAGCTCC AAGAGCGTGA TTTCCGTAAT GTTGTGGTTC TTGGCGGCGG CTACATTGGT
GTGGAACTTG CGGAAGCATT TGAACGTTTG AACAAAAACG TAACTCTTAT TGACATGGAA
GACCATATTC TTAACGGCTA CTTTGACCCA GAGTTTTCCA ATAATTTGAA GCAAATTATG
GAGAATAAAG GCATTAAGTT TGAACTTGGT CAAACTGTTG AAGAAATTGT TGGAGACACT
GAAGTCAAGG CTGTTAAAAC AAGCAAAGGC ACTTACGAAG CCGACATGGT GATTTGCGCT
ATTGGCTTCC ACCCAAACGT TGCGCTCGGC AAAGACCACT TAAAGCAGTA TGCTAACGGC
GCTTTCCTTG TTGACAAGAA GCAGCAAACT TCCGATCCAG ACGTGTACGC AATCGGCGAC
TGCGCTACAA TCTACGACAA TGCTCGAGAC CGCGTGAACT ACATTGCGCT CGCTACTAAC
GCCGTTCGAA GCGGCTTGAT TGCAGGTCAC AACGTTTGCG GAACTCCTGT AGAAACCGAG
GGTGTGCAAG GCTCTAGCGC AATGATGATT TACGATTACA AGCTTGTTTG CACTGGCTTG
AGCTTGACTG CCGCTCAAAA AGAGGGCATG GACGTTGATT ACGTTGATTT TGAGGATACT
CAAAAGCCTG CGTTTATGGA AGTTGAGAAT CCAAAGGTGA AGATTCGCAT CGTTTACAAG
AAGGATACGA AGGTTATTGT TGGATGCCAG TTGGCTTCTA ACTACGATAT GTCTGCCGCA
ATTCACCTGT TCTCGCTGGC TATTCAAAAG AAGGTCACGA TTAAAGAGCT TGCTTTGTGC
GACATCTTCT TCATGCCTCA CTTCAACCAG CCGTACAACT ACATTACGAT GGCTGCTTAC
ACGGCTTTGT TGAAGGGATG A
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| Protein sequence | MTKIIQIGAN HAGTACANTI LSYPGNELTI YDQNSNISFL GCGMALWIGK QIQSSDGLFY
QKPEDFVKKG AKVNLESKVL DIDYAKKEVT VELKDGTVIH DSYDKLVLAT GSLPNKPRIK
GIDLENVQMV KLFQNAQTVI AKLQERDFRN VVVLGGGYIG VELAEAFERL NKNVTLIDME
DHILNGYFDP EFSNNLKQIM ENKGIKFELG QTVEEIVGDT EVKAVKTSKG TYEADMVICA
IGFHPNVALG KDHLKQYANG AFLVDKKQQT SDPDVYAIGD CATIYDNARD RVNYIALATN
AVRSGLIAGH NVCGTPVETE GVQGSSAMMI YDYKLVCTGL SLTAAQKEGM DVDYVDFEDT
QKPAFMEVEN PKVKIRIVYK KDTKVIVGCQ LASNYDMSAA IHLFSLAIQK KVTIKELALC
DIFFMPHFNQ PYNYITMAAY TALLKG
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