| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0561 |
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| Symbol | |
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| ID | 8708847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 606851 |
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| End bp | 607984 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646482671 |
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| Product | alcohol dehydrogenase, iron-dependent |
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| Protein accession | YP_003373798 |
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| Protein GI | 283783044 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000345688 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCAGC TTTCTATTAA ACCAACTATT CATAAGTTCG AGAACGCACG CGACTTCGCG
CAAGAATTCA AGCTCAGCAA GGGCGATTTG GTTATTACAA ACCAGTACAT TTGGGAGCCT
TATTTTGGCG ATTTGAATCT TGATTGCGAC GTGATTTTCC AAGAGAAATA CGGCAAGGGT
GAGCCGAGCG ACGCAATGGT TGATGCAATC GTTAGTGACA TTCACACAAC TCCAAAGCGC
GTGATTGGCA TTGGCGGCGG CACTGTTTTG GATATTTCGA AGGTTTGTGC GTTGAAGCAA
ACAAGCCCGC TTGAAGACTT GGTTGACGGC AAGATTCCTG CACAAAAAGG CGCGGATCTT
ATTCTTGTTC CAACTACTTG CGGCACTGGC TCCGAAGTTA CGAACGTTGC GGTGTTCTCG
CTTACTAGGC GCAATACCAA GAAGGGTTTG GCGAACGATG CTTGCTATGC TACGGACGCT
GTTCTTATTC CAGAATTGTT AAAGAGCCTG CCTGATTACG TTTTTGCAAC CAGCTCTATT
GACGCTCTTA CGCATTCGAT TGAGTCCGCA CTTTCTCCTA TTGCAACCGA GCTTACAAAA
ATGTTTAGTT ACAAGGCTTG CGGGCTTATT TTGCAAAGTT ATATGCGAGT TGTTAAAGAA
GGCAGCAGCG CAAAAAGCCA AGTTGTAAGC GACTTGGTTT CGGCAAGTCT TTACGCTGGT
ATTGCGTTTG GTAACGCTGG CTGCGGTTGC GTTCACGCGA TGGCTTATCC GCTTGGTGGA
ACTTTCCACG TGGCTCACGG CGAAACGAAT GCAGCTCTTC TTACCAGCGT TTTGAGATAT
TATGCTAAGC ACGACACTAA AAACAGCACT AGCGCTGAAA ACACTGAGCT TTCTAAACTT
TTCGACTTTA TGGCAAATAT TCTTGAATGC CAAAAAGCGG ACGTACTAGA CAAGCTCGAC
GAAGTGCTTA ACACCATTCT TCCTAAGCAC AAGCTTCACG AGTATGGAAT GACCGAGGAT
ATGATTCAAA GTTGGGCTGC AAGCGTTGTC AAAGAGCAGC AGCGACTTTT GAAGAACTCC
TACATGCATA TGGACGAAGC CGCCATTGCC GAAGTCTACG CGTCTACTTT CTAA
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| Protein sequence | MKQLSIKPTI HKFENARDFA QEFKLSKGDL VITNQYIWEP YFGDLNLDCD VIFQEKYGKG
EPSDAMVDAI VSDIHTTPKR VIGIGGGTVL DISKVCALKQ TSPLEDLVDG KIPAQKGADL
ILVPTTCGTG SEVTNVAVFS LTRRNTKKGL ANDACYATDA VLIPELLKSL PDYVFATSSI
DALTHSIESA LSPIATELTK MFSYKACGLI LQSYMRVVKE GSSAKSQVVS DLVSASLYAG
IAFGNAGCGC VHAMAYPLGG TFHVAHGETN AALLTSVLRY YAKHDTKNST SAENTELSKL
FDFMANILEC QKADVLDKLD EVLNTILPKH KLHEYGMTED MIQSWAASVV KEQQRLLKNS
YMHMDEAAIA EVYASTF
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