| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0557 |
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| Symbol | |
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| ID | 8708809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 600937 |
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| End bp | 601794 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646482667 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373794 |
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| Protein GI | 283783040 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000428757 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAATGA AGGATGCTAA TCAGCTTAAA GCAAAAATAA AGAATGTTGC ACTCCAAAAG
GGTGTAGATC CTCGCGTGCT AATGCGCGTA TATATGATGG AGCGTTTTTT AGATCGTGTT
TCCCGCTCGC GGTATAAAGA CAATTTTGTT CTAAAAGGTG GAATGCTGAT TTCTTATCTT
GTTGGCGTAA ATCTTCGTAC AACAATGGAT ATTGATACAA CTATGCAAAA TATTTCTCTT
AGTGAAGATG ATGTGCGTAT TTTTATATCA GATGTAATAT CTATCAATAT CGATGATGGT
GTTAAATTTA CGCTACAAAC GCTTGATTCT ATTATGCAAG AATCTGACTA TCCAGGGGTT
CGAGCTAGCC TAATTGCAGA TTTTGATGGT ACAAAAACTC CTGTCAAAAT CGATATTTCA
ACTGGGCATG CTATTACTCC ATCTGCTATG GAAGCAGAAT TGCCTTTAAT GTTCTCAAAA
TCTATCTCTT TATTGACTTA TCCAATTGCA ACGATTTTAG CAGAAAAGTT GCAAACAATT
CTTGTGAGGG AAGAATTTAA CACGAGAATG CGAGATTTTT ATGATTTGCA TGCTCTTAGA
GTGTCTCAAG GAGATAATGT CTTTAAGAAA GAAGAGATTG CTAAAGCTTT TTACGCTACT
TCTCAAACGA GAAACACCTT TTATTTACTG AGTAACGTGA ATGAAATTTT CGATAGGATT
AAAGATAGTG AAGTGATGAG AATAAAGTGG AAGGATTACC AAAGGAAAGC ACCTTGGGCT
AAAAGTCTTT CTTGGGAAGA AATAATGCAA GATATGAATT TCTTTTTGAT GTTCTTTCAT
AATGAGGTTG TAGCTTAA
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| Protein sequence | MRMKDANQLK AKIKNVALQK GVDPRVLMRV YMMERFLDRV SRSRYKDNFV LKGGMLISYL
VGVNLRTTMD IDTTMQNISL SEDDVRIFIS DVISINIDDG VKFTLQTLDS IMQESDYPGV
RASLIADFDG TKTPVKIDIS TGHAITPSAM EAELPLMFSK SISLLTYPIA TILAEKLQTI
LVREEFNTRM RDFYDLHALR VSQGDNVFKK EEIAKAFYAT SQTRNTFYLL SNVNEIFDRI
KDSEVMRIKW KDYQRKAPWA KSLSWEEIMQ DMNFFLMFFH NEVVA
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