| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0549 |
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| Symbol | cysK |
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| ID | 8708994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 593098 |
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| End bp | 594030 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482659 |
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| Product | cysteine synthase A |
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| Protein accession | YP_003373786 |
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| Protein GI | 283783032 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000133483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTCCAACA TCTACAAGTC CGTGCAAGAA CTCGTAGGCC ACACTCCACT TCTGGAGCTT
ACTCACATTG AAAAAGAGTA CAATCTTCAA GCAAAAATCC TCGTAAAACT CGAATACTTC
AACCCAGCAG GTTCCGTAAA AGACCGCATC GCAAAGCAGA TGATTGAAGA AGCAGAAGCC
GCAGGCACGA TTAAACAAGG CTCAGTAATT GTTGAGCCAA CTTCTGGAAA TACTGGCATT
GGTCTTTCAA TGATTGCGCA AACAAAAGGA TACAAAAGCA TTATTGTAAT GCCAGAAAGC
ATGTCTATTG AACGTCGAAA ACTCATGAAA GCTTACGGCT CCGAACTCGT GCTCACACCT
GCTGCAGAAG GAATGAAAGG CGCAATTGCC AAAGCGAAGG AAATCGTTGA AAGCACGCCA
AATGCGTGGA CTCCAGGACA GTTTACCAAT CAAGCAAATG TGCACGCGCA CTACAACACA
ACTGGTCCAG AAATTTGGCA AGACACTGAC GGAAACGTGG ATATGCTTAT TGCAGGCGTT
GGAACAGGCG GCACAATCAC TGGTACTGGC ACATACTTAA AAGAGCAAAA TCCGCATCTT
GAAGTAATCG CAGTAGAACC AGCCGACTCC CCTGTGCTCG CAGGCGGAAA ACCAGGAGCG
CACAAGATTC AAGGAATCGG CGCAGGATTC GTGCCAGATG TGCTCAACAA AAACATTTAT
AATCGCATTG TTCACGTAAC AAATGAAGAC GCAATCGAAA ACGGCAAGCT TATAAGCAAA
AAAGAAGGCG TCCTCGTTGG TATTTCTTCC GGAGCTGCGA TTTGGACAGC AATCCAAGAA
GCAAAAAGAG AAGAAAATAG TGGCAAAACC ATAGTTGCAA TACTGCCAGA TTCAGGAGAT
CGATACTTGT CTACCGCATT ATTTGAAGAC TAA
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| Protein sequence | MSNIYKSVQE LVGHTPLLEL THIEKEYNLQ AKILVKLEYF NPAGSVKDRI AKQMIEEAEA
AGTIKQGSVI VEPTSGNTGI GLSMIAQTKG YKSIIVMPES MSIERRKLMK AYGSELVLTP
AAEGMKGAIA KAKEIVESTP NAWTPGQFTN QANVHAHYNT TGPEIWQDTD GNVDMLIAGV
GTGGTITGTG TYLKEQNPHL EVIAVEPADS PVLAGGKPGA HKIQGIGAGF VPDVLNKNIY
NRIVHVTNED AIENGKLISK KEGVLVGISS GAAIWTAIQE AKREENSGKT IVAILPDSGD
RYLSTALFED
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