| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0548 |
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| Symbol | |
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| ID | 8709876 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 592284 |
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| End bp | 592970 |
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| Gene Length | 687 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000113219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATGAGC ATCTTGACCT TATAAACAAA CTCAACTCAA TTCATGATTC TGACATAAGG
CAAGCTACAT TCATACCTAA CTATCACAAT ATTATTGCGC TCATACATGC AACTCAGGTG
TTACTTTTGC CTGAGTTGCA TGCACGCAAT GTAAGTAACG ATACTGCGCA ACTCAATGCC
ACTTTGAATA CCGTTACTTC AAACGCGTTA GACACTATAG AACGCATTAT ATTCCACGAA
CTTCAATCCT ATACAAGCAA CTCAATTAAA ATTCAAGAAA CTTGCAATCA ATTCATACAT
AAACTTCCTG CAATTAAAAA GTTACTTTTA ACAGATATTC AAGCAATATA TGAAGGCGAT
CCTGCTTGCA CAAGCAAAGT AGAAGTCACG CTCGCATACC CTGGTTTTTA CGCAATGCTT
ATTCACCGCA CAGCTCACGC ACTCTACGAG CTTAACGTGC CACTAATTCC TAGACTTATG
AGCGAATATG CTCACAGAAA AACCGGAATT GACATTCATC CAGGAGCAAA AATTGGTGCA
TATTTTTGCA TTGATCACGG AACTGGCATT GTAATCGGCG AAACAACTAT AATCGGCGAG
CATGTTAAGC TTTACCAAGG AGTAACGCTT GGTGCGAAAA GCTTTGCGCT AGACGAGGAT
GGAAATCCTG TAAAAGGCGG AAAGTGA
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| Protein sequence | |
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