Gene HMPREF0424_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0548 
Symbol 
ID8709876 
Type 
Is gene splicedNo 
Is pseudo geneYes 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp592284 
End bp592970 
Gene Length687 bp 
Protein Length 
Translation table 
GC content40% 
IMG OID 
Product 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000113219 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATGAGC ATCTTGACCT TATAAACAAA CTCAACTCAA TTCATGATTC TGACATAAGG 
CAAGCTACAT TCATACCTAA CTATCACAAT ATTATTGCGC TCATACATGC AACTCAGGTG
TTACTTTTGC CTGAGTTGCA TGCACGCAAT GTAAGTAACG ATACTGCGCA ACTCAATGCC
ACTTTGAATA CCGTTACTTC AAACGCGTTA GACACTATAG AACGCATTAT ATTCCACGAA
CTTCAATCCT ATACAAGCAA CTCAATTAAA ATTCAAGAAA CTTGCAATCA ATTCATACAT
AAACTTCCTG CAATTAAAAA GTTACTTTTA ACAGATATTC AAGCAATATA TGAAGGCGAT
CCTGCTTGCA CAAGCAAAGT AGAAGTCACG CTCGCATACC CTGGTTTTTA CGCAATGCTT
ATTCACCGCA CAGCTCACGC ACTCTACGAG CTTAACGTGC CACTAATTCC TAGACTTATG
AGCGAATATG CTCACAGAAA AACCGGAATT GACATTCATC CAGGAGCAAA AATTGGTGCA
TATTTTTGCA TTGATCACGG AACTGGCATT GTAATCGGCG AAACAACTAT AATCGGCGAG
CATGTTAAGC TTTACCAAGG AGTAACGCTT GGTGCGAAAA GCTTTGCGCT AGACGAGGAT
GGAAATCCTG TAAAAGGCGG AAAGTGA
 
Protein sequence