| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0534 |
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| Symbol | |
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| ID | 8708916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 571208 |
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| End bp | 571927 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 646482647 |
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| Product | DNA (cytosine-5-)-methyltransferase |
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| Protein accession | YP_003373774 |
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| Protein GI | 283783020 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0863] DNA modification methylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000146587 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTCTAAAA TAGAACTTTA CAACGATGAC TGTATTGTTG CTATGGATAA TCTTAGGGCA
AAATCAATAG ATTTAATTGT TACAGATCCG CCATATAATC TTGGTAGTTT TATGAAAACT
AGAGATACTA ATCTAAAAAA GATGAGAGAC AATTTTTTTG CTGCCGCAGG TTGGGATGAC
ATGGGTTTTG AGGAATGGAA GAAATCCATG GAGTCTTTTT TTGAACTATC TTCTAGAGTC
ATGAAAAAGG GTGGCTCTAT GATTGTGTTT ATGGCTATTA TAAAAGTTGA AACGATTATA
AAGTTAGCTG AGGAATATGG ATTTTACTAT AAGACAACAG GGATTTGGCA TAAAACTAAC
CCTATGCCCA GAAATATGAA TTTACATTTT GTAAATTCTA CAGAAGCATG GGTGTATTTC
ACTTATAAAA CAAAGACTGG AACATTTAAC AATGGTGGAG CTATGTTTCA TGATTTTATA
GAAACATCCG TCACTCCGAA TAGCGAAAGA AAATATGGAA AACATCCAAC GCAAAAGCCA
GAAAGTTTGA TGCAGCACTT TGTAGAAATA CTTTCCAACC CTGGTGATAA TATTCTAGAT
CCATTTATGG GCTCTGGAAC AACGGGAGTT GTTTCAAAAC GAGCTGGTCG CAATTTTATA
GGTATAGAAT TAAACTCAGA ATACTACAAC ATTGCTAAAT CTAGGATAGA GGGCAAATAA
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| Protein sequence | MSKIELYNDD CIVAMDNLRA KSIDLIVTDP PYNLGSFMKT RDTNLKKMRD NFFAAAGWDD
MGFEEWKKSM ESFFELSSRV MKKGGSMIVF MAIIKVETII KLAEEYGFYY KTTGIWHKTN
PMPRNMNLHF VNSTEAWVYF TYKTKTGTFN NGGAMFHDFI ETSVTPNSER KYGKHPTQKP
ESLMQHFVEI LSNPGDNILD PFMGSGTTGV VSKRAGRNFI GIELNSEYYN IAKSRIEGK
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