| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0517 |
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| Symbol | |
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| ID | 8709006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 559248 |
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| End bp | 559451 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 646482631 |
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| Product | DNA-binding protein |
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| Protein accession | YP_003373758 |
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| Protein GI | 283783004 |
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| COG category | [K] Transcription |
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| COG ID | [COG1476] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00223122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGAAAAATA GACTTGAACA AATTAGAAGA GAAAAAGGCA TAACACAAGA AGAACTTGCA
GATGCACTTG AAGTATCAAG ACAGACAGTC GGTTCTTTGG AAAATGGAAG ATACAATCCA
TCAATCATAT TGGCATACAA AATTGCTAAG TACTTTAATT TAACAATCGA AGAAATATTT
ATCTACGAGG AAGATAAAAA ATGA
|
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| Protein sequence | MKNRLEQIRR EKGITQEELA DALEVSRQTV GSLENGRYNP SIILAYKIAK YFNLTIEEIF
IYEEDKK
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