| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0483 |
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| Symbol | |
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| ID | 8709101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 527436 |
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| End bp | 528521 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646482597 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_003373724 |
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| Protein GI | 283782970 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGAAG ATGCTGAATT TTCGCAAAAA TTTTCTGTTG GCATTGTAGG TCTTGGTCTT
ATTGGTGGAT CTCTTGCAAA ACGACTTGCT AAACTGGCAA ATTGCAACGT ATATGCATGG
AATCGTCATA ATGAGCCTTA TGACGAAGCT AAAAGTTTAG GAATTACTTG CGTAGAAAAA
GTGCAAGATT TAGCAAAACT TCGTCCAAAT GTTTTGATTT TATGCAATGC TTTAGCCGCT
ATGCCAAGTA TTTTGCATGA AGTTGCACCT TATATTGACA AATCTTGCAC AACTATTAGC
GATGTTGGCA GCGTAAAAAC TTTAGTTCGA GAGCAAGTAA AAGATGCAGG TTTGCAAGAT
TGCTACGTTG GTGCGCATCC GATGGCTGGT AGTGAATTTA CTGGTTGGAA AGCTTCTAGT
GGTGAGCTTT TAAATGGTGC TTTGTGGGCT TTAACTGTTG ATGATTCTAC TGAGTTTTGG
CGAGTTAGAA ATATTTTGCA AATGATTGTT TCGCTATGCA AGAATCGCGC AATAGTTTTG
GATGATGCAA CGCACGATAA TTCTGCAGCT CTTATTTCTC ATATGCCTCA TGTTGTTGCA
ACAGCTCTTG CAAACGTATT ATGTGAACAA TCTAATCGTG CTATTGCTTT ACAACTATCT
GCAGGTTCCT GGCGAGATAT GACACGAGTT GCTCTTACTG ATCCTCAACG CACTCGTGCT
ATGGTAAGTG AAAATCGGCA TAATACTGCG AAATTATTGC GTTCCGTAAT TTCTGAGCTA
ACTTTTGCTG CAAATATGTT AGATAATGAT GTTGAAACCG CGGATGCTTT AGAGCAAGAG
TTTTTTGCTA AAGCTCAATC TTGGAGAGAA TATAAATACT TGCAGCGCAA CTCGTCTAAA
ACTAGTATGC AACAAAGCGA TGCTGCAAAT AGCAGATTGT GGAAGTATGA TTCTCAAATC
AATTGGCAGC AGGAATTATT AGAATCCGCG CGCTTAGGAG AATCCATTGT TGAACTTTCC
GGATTTAACA TCAACGAATC TTCGCAACTG CTATTGCGCT CAGATGCTTC CTTGAGAAAT
GTGTAA
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| Protein sequence | MVEDAEFSQK FSVGIVGLGL IGGSLAKRLA KLANCNVYAW NRHNEPYDEA KSLGITCVEK
VQDLAKLRPN VLILCNALAA MPSILHEVAP YIDKSCTTIS DVGSVKTLVR EQVKDAGLQD
CYVGAHPMAG SEFTGWKASS GELLNGALWA LTVDDSTEFW RVRNILQMIV SLCKNRAIVL
DDATHDNSAA LISHMPHVVA TALANVLCEQ SNRAIALQLS AGSWRDMTRV ALTDPQRTRA
MVSENRHNTA KLLRSVISEL TFAANMLDND VETADALEQE FFAKAQSWRE YKYLQRNSSK
TSMQQSDAAN SRLWKYDSQI NWQQELLESA RLGESIVELS GFNINESSQL LLRSDASLRN
V
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