| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0467 |
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| Symbol | murE |
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| ID | 8709146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 511376 |
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| End bp | 513175 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482582 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_003373709 |
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| Protein GI | 283782955 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAACA CGTTGTCACT AGCAAACGCA AGTGAAATTT TGCAACACTA TGGATTGTTA
CGCGAAATGA TTCAATATGG TAAAGCAGAA GATACTAATA CTGCTAATGG TGCTAATACT
AAAGAAAAAA CTATAGACTC TACTCATTCT CGCAATGAAA TATGGTCTTT AAATCCGTAT
TATTTCCCAA ATATTGATGC AGATGAGTAC TTTACTAACG CAACTTACGA TACTCGCGAT
ATTAAATCTG GAACACTTCT GTTTATTAAA GGCAATTTTA AGTCGGAATA TCTTTTAGAT
GCAGACAACA AAGGACTTGC TGCATATGTT GCTGAACAAA GCTACGCACA ATACACAAAA
GCTGTTGGTT TAATTGTTAC GGATGCTAAA AAAGCAATGA GCGTGCTTGC AGCAGCATTC
TTTGGAAATC CACAAGAAAA ACTCACTATT GTTGGAATTA CTGGAACTAA AGGCAAAACA
ACTACAGCCT ACTTTACTCA CGCTATTCTA AACTCCCATT CGCACGGTAA AGCAGCACTG
TTTTCCTCAG TAGATAATTG CGTAGACGGA AAAAATTACG TTGAATCTAA TTTAACTACC
CCTGAAAGTT TTGATGCTTT CAAAATGATG CGCGAAGCTG TAGATAACGA CATGAAGTAT
CTTGTTATGG AAGTTTCTTC GCAAGCTTAT AAGGTGAATC GCGTATACGG TCTTAAATTC
GATGTTGCAG CATTCTTAAA CATTAGCCCA GACCACATTA GCCCTATTGA GCACCCAACT
TTTGAAGATT ACTTGTATTG CAAACGACAA ATTATTGCAA ATACTAAGCG TTTAGTACTA
AATTCTGATA CAGATCACGC AGATCTTCTT TTACAAGATG CGGAACGCAA CAATGTGCTC
GTAACAACTT TTGCTCGCAT TAAAAAAGAT GAAATAGAAG GCGATGCTTG CGAAAATAAC
AATTTCGATG ATCTTGACGA CGATTGCATA AATTATTGCG CGCCTGCTAA CGATGACGAT
TATACAGAAT TACTTACTCC TGACTACATT GCAATGCCAG TAGAAAATAG TGAATCACAT
TGCATCGCTA TGCGAGACTC AAGCGAAGAC GACGACTATG AAGATAACGA CTACGAAGAA
GACGTGCACT ACTGCCCTAT TGACGAATTC GCATTGTCTA TTGCAGGAGA TTTTAACTAC
GAAAATGCTT TAGCTGCAAT CGCTATTGCA GGAGAATTGG GAATTAATCA GGATACTGAT
TTACACGCAC TACACGCTAT TGAGAACGTG AAAATTTCTG GACGCATGGA AGTTTTCAAA
GACACGCACT CAAACATGAT TGCAGTTGTC GACTATGCGC ATAACTACAT TTCTACAAAA
TCAGTTCTTG ACTTTGTAGA AGAACGCTAC GGCAAATTTA ATCCTCGAAT TACGCTAATA
ACTGGTTCCA CAGGAGATAA AGCTGTCGAC CGTCGTAAAG AAATTGTTGA AGCCGCGCAA
AACCGCATAG AACAGTTTAT TTTCACTACT GAAGATACTG ATACTGAAGA CGTAATGCAT
ATTTGCGAGG ATATGCAAAG TTATGTTACG AACCCAAATG TTTCTTCACG CATTATTATC
GACAGAGCTG AAGCAATAGA ATGCGCTTAC AACGATGCAG CAAGTAGCGA ACAAAAAAAT
GGAAGATTAA ACATTCTTCT TGCTATTGGT AAGGGCGATG AACGTTGGAT TAAAAACAAA
CGAAAGCATG TGCCGTATGA GGGTGATTCA TTCGTAATAA AGCGTCTTTT TGGTCTGTAA
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| Protein sequence | MHNTLSLANA SEILQHYGLL REMIQYGKAE DTNTANGANT KEKTIDSTHS RNEIWSLNPY
YFPNIDADEY FTNATYDTRD IKSGTLLFIK GNFKSEYLLD ADNKGLAAYV AEQSYAQYTK
AVGLIVTDAK KAMSVLAAAF FGNPQEKLTI VGITGTKGKT TTAYFTHAIL NSHSHGKAAL
FSSVDNCVDG KNYVESNLTT PESFDAFKMM REAVDNDMKY LVMEVSSQAY KVNRVYGLKF
DVAAFLNISP DHISPIEHPT FEDYLYCKRQ IIANTKRLVL NSDTDHADLL LQDAERNNVL
VTTFARIKKD EIEGDACENN NFDDLDDDCI NYCAPANDDD YTELLTPDYI AMPVENSESH
CIAMRDSSED DDYEDNDYEE DVHYCPIDEF ALSIAGDFNY ENALAAIAIA GELGINQDTD
LHALHAIENV KISGRMEVFK DTHSNMIAVV DYAHNYISTK SVLDFVEERY GKFNPRITLI
TGSTGDKAVD RRKEIVEAAQ NRIEQFIFTT EDTDTEDVMH ICEDMQSYVT NPNVSSRIII
DRAEAIECAY NDAASSEQKN GRLNILLAIG KGDERWIKNK RKHVPYEGDS FVIKRLFGL
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