| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0466 |
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| Symbol | |
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| ID | 8709155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 510000 |
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| End bp | 511241 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646482581 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373708 |
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| Protein GI | 283782954 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3919] Predicted ATP-grasp enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATC AACGATTTCA ACCTGTGTTA CTCGGTAGCG ATATAAACGC ATACGGCATG
GCTCGAGCAT TCCATGAAGA ATATGGCATT ACTTCAATTG CTTTTGCGCA CTTCCAACTT
TCACCTACGA AATTTAGCAA AATTGTCGAT GTGAGAATTG TTCCAGGCTT TGGAGAACTT
CCTACATTCC GCAATACAAT GCTTAATTTT GCTAAATCAT GGCATCAAGA GCATCCTAAT
ACCAAACTCC TGCTTATTCC TTGCGGCGAC GTATATGCGA ACCTTCTAAG CCAATGCGGT
GATGAATTGC ACGAATATTT TGCTTTCCAC ACATTGCCAA ATTCGCTCAA TCGCCAGCTT
AGCCTTAAAA GCTCATTCTA TAAAACTTGT GAAAAATACA ATCTTCCTCA TCCAAAAACT
AAAGTTGTAA ACGCTCAAGA AGTGGCAGCG CACGCTTATG AAGATTTGCC ATTCAGCTTC
CCTATTGCTA TGAAAGCAGC GAATAGCACT AAATGGCTTG ATATTGATTT TGAGGGACGT
AAAAAAGCTT TTATTATCAA TACTCCGCAA GAACTTGATA CTCTTATTCA ACGCTCGTAC
AAAGCTGGCT ACGATGACGA AATGATTTTG CAAGACTTTA TTCCTGGAGA CGACAGCCGC
ATGCGTGTGC TAAATGCTTA CGTTGATAGC AATCATCATG TGCGCATGAT GTTTTTAGGA
CACCCTCTAC TAGAGGATCC AACTCCAGAA GCAATCGGAA ATTATGCAGC TATTATTCCA
GACTACAATG AAGAAGTTTT CCAAAATATT AAAGCATTTT TGGAAGATAT ACATTACGTT
GGCGTAGCTA ATTTTGATAT GAAATACGAT GAGAGAGACG GAAAATATAA GCTTTTTGAA
ATCAATTTAC GCCAAGGCCG TTCAAGCTAT TTCGTCACTT TAAACGGATT TAATATTGCT
AAATATTTTG TTGAAGATTT AATTGACCAT AAGCCTTTTG ACGGAAATAC TGTGTTCGGT
CGTGGAGAAA AGTTGTGGAT GGAGATTCCG CGATCGATAT TTTGCAATTA TGTAGCAGAA
GGCGATGAAA AGAAGCGCGG TCTTAATATG ATTCGTCGCG GCGATTGGGG CACTACGCTA
GAATATAAAA AAGATATGAA TCTGCTACGC TGGTTGATGA TTCGTCATAT GTTTTCAATT
TACACAAGGC GTTACGCAGA ATTTTTCCGC AATAAAGCGT GA
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| Protein sequence | MKNQRFQPVL LGSDINAYGM ARAFHEEYGI TSIAFAHFQL SPTKFSKIVD VRIVPGFGEL
PTFRNTMLNF AKSWHQEHPN TKLLLIPCGD VYANLLSQCG DELHEYFAFH TLPNSLNRQL
SLKSSFYKTC EKYNLPHPKT KVVNAQEVAA HAYEDLPFSF PIAMKAANST KWLDIDFEGR
KKAFIINTPQ ELDTLIQRSY KAGYDDEMIL QDFIPGDDSR MRVLNAYVDS NHHVRMMFLG
HPLLEDPTPE AIGNYAAIIP DYNEEVFQNI KAFLEDIHYV GVANFDMKYD ERDGKYKLFE
INLRQGRSSY FVTLNGFNIA KYFVEDLIDH KPFDGNTVFG RGEKLWMEIP RSIFCNYVAE
GDEKKRGLNM IRRGDWGTTL EYKKDMNLLR WLMIRHMFSI YTRRYAEFFR NKA
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