| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0458 |
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| Symbol | trmB |
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| ID | 8709873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 502456 |
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| End bp | 503274 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646482573 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_003373702 |
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| Protein GI | 283782948 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG AAAATGAAAA CGAAAACACT ATGCAAGCCA AGCAACGCAC TGTATTGTCG
TTTGTGCGTC GTTCTGGGCG CTTAGATGCG CGTTTACAGC ACGCTCAGGA GCGTTATGCA
AGTCAGTACC TGCTAGACGT TACTGAAGCA CCTGGCTCAT TTAGATTGCG CGAAAATTTG
AACATTACGC ATGATTGGAT TAGCGATAAG TGGGGGAATG ACAATCCGCT TATTGTTGAA
ATTGGTTCCG GACAAGGCGA AAACATTGTT GCCGCAGCTG AACGTTTGCC GGAAACTAAC
TTTTTAGCGC TTGAAGTTTA TGATCCAGGC GTTGCTCACA CAATGCTTCT TGCTGGAAAG
CAAGGTTTGA CTAATCTTCG TATTGCACAA ATTAACGCTC CTGATTTCTT CGCTGCGTGC
GACTGCGGAG TTTTAGAAGA AGTTTGGACT TTCTTCCCGG ATCCATGGCC TAAAATGCGC
CACCATAAGC GTCGTATTGT GCAGCCAGAG CTTGTCTCTA CAATACACCA GGCATTGCGT
AGAGGGGGTG CGTGGCGCAT TGCTACAGAT ATTGAGGATT ACGCTTTGCA TGTGCATGAG
ATTATGGATT CTCGCGAAGA TTTTGCAAAT ATTGGCGAAT TAAGCGCAAG TCTTCCAATT
GAGCATGTAG GGAAAGGTAC AGCTGATACT GCAGCAGCTC TTCCGCACGC AGATTTTAGC
GAGTCTGAGC GCTTTGCTGG TCGAGTTCTT ACGAATTTTG AGCGCAAAGG CTTGGAGGCT
GGTCGCACGA TTCACGACTT CACCTACATA GCACAATAA
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| Protein sequence | MSTENENENT MQAKQRTVLS FVRRSGRLDA RLQHAQERYA SQYLLDVTEA PGSFRLRENL
NITHDWISDK WGNDNPLIVE IGSGQGENIV AAAERLPETN FLALEVYDPG VAHTMLLAGK
QGLTNLRIAQ INAPDFFAAC DCGVLEEVWT FFPDPWPKMR HHKRRIVQPE LVSTIHQALR
RGGAWRIATD IEDYALHVHE IMDSREDFAN IGELSASLPI EHVGKGTADT AAALPHADFS
ESERFAGRVL TNFERKGLEA GRTIHDFTYI AQ
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