Gene HMPREF0424_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0456 
SymbolftsZ 
ID8709718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp500600 
End bp501814 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content47% 
IMG OID646482571 
Productcell division protein FtsZ 
Protein accessionYP_003373700 
Protein GI283782946 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0206] Cell division GTPase 
TIGRFAM ID[TIGR00065] cell division protein FtsZ 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGA TTGCCCAGAC TGACAATTTC AACGACAAAA CCATCATCAA GGTAGTCGGC 
GTCGGTGGTG CCGGCGGTAA CGCCGTCAAT CGGATGATCA GCGAGGGTCT ACAGAATGTA
GAGTTTGTGG CCATTAATAC TGACGCTAAA GATTTACTGC GTTCTGATGC TGATGTAAAG
ATTTCATTAT CTGATGCTTC GAGCCGAGGC TTGGGTGCTG GTGCTGATCC TGAAAAGGGT
GCTAAGGCTG CGCAGGATCA TCAATCAGAC ATTGAAGAGG CACTTAAGGG TGCTGACATG
GTGTTTGTTA CCTGCGGTGA AGGCGGCGGC ACGGGTACTG GTGCAAGCCC AATTGTGGCT
CGTGCAGCTC ATCAGCAAGG TGCTTTGACT ATTGCTGTTG TTACACGTCC ATTCGGTTTT
GAAGGACCGC AACGTGCTGC ATCTGCAAAA CTTGGTATCG AGAATCTTCG CAAAGAAGTT
GACGCGTTGA TTGTTATTCC AAACGATCGT CTTTTGGAAA TTTCTGATCG TACTATTGGA
ATTATTGAAG CATTTAAGAC GGCAGATACT GCGTTGCTCG CAGGTGTGCA AGGCATTACT
GATTTAATTA CCATGAATTC TTACATTCAT GTTGATTTCT CTGATGTTAC AGCTGTTCTT
CGCGGAGCAG GTACCGCACT GTTCGGTATT GGTGCTGCAA AAGGCGAGGA TCGTGCAACT
CAGGCAGCTG AAATTGCTAT TAGCTCCCCA TTGCTGGAAG AAAGCATTGA GGGTGCTCAC
GGTGCTTTGA TTAATATCGC AGGTCCAAGT GATTTGAAGC TTCAGGAAGC TTCTGCTGCA
ACTGAACTTG TTCGTAAAGC TATTCATCCA GAAGCTCAAA TTATTTGGGG TCTTTCCCTC
GATGATTCTT ACGGCGATGA GGTTCGAGTT ACGGTTATTG CTGCTGGATT TGATGCTCAT
CCTAAGGCGG AGGAGTCCTC GGCTAAAGCT GGTCAGTTTG TTGATATGCA AGCAGATGTT
AAGCCTGTAG CTCCTGCACA GTCTACCTCA TCTTTCAAAG AGGAAGCTCA AGCTGCTCCA
CAAGTAGAAC AACCTGCTTC TATGCCTTCT ATGTTTGAGC CTGCGATGAA TCATCAGCAA
TATTCTCCTG CGGCAGCTCC TGTACAGCAG CCTGCTGAAC CTGACGAATT AGATATTCCT
GATTTTCTGC GTTAA
 
Protein sequence
MSEIAQTDNF NDKTIIKVVG VGGAGGNAVN RMISEGLQNV EFVAINTDAK DLLRSDADVK 
ISLSDASSRG LGAGADPEKG AKAAQDHQSD IEEALKGADM VFVTCGEGGG TGTGASPIVA
RAAHQQGALT IAVVTRPFGF EGPQRAASAK LGIENLRKEV DALIVIPNDR LLEISDRTIG
IIEAFKTADT ALLAGVQGIT DLITMNSYIH VDFSDVTAVL RGAGTALFGI GAAKGEDRAT
QAAEIAISSP LLEESIEGAH GALINIAGPS DLKLQEASAA TELVRKAIHP EAQIIWGLSL
DDSYGDEVRV TVIAAGFDAH PKAEESSAKA GQFVDMQADV KPVAPAQSTS SFKEEAQAAP
QVEQPASMPS MFEPAMNHQQ YSPAAAPVQQ PAEPDELDIP DFLR