| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0449 |
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| Symbol | |
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| ID | 8710038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 492681 |
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| End bp | 494192 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482564 |
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| Product | DivIVA domain repeat protein |
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| Protein accession | YP_003373693 |
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| Protein GI | 283782939 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03543] DivIVA domain repeat protein
[TIGR03544] DivIVA domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.148469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGA AACCTGATAC CGCTCGTAAT GCTTCAGCAA TGGAGCGTGT GGGTAAGCGT
AAGTTAGGAT ATAACGTCGC ACAGGTGAAT GCTTTTCTAG AGCGTGCTCA CACTTTGTAC
GAAAGCGATG AAGCTCGACT TACGCAGAAA GATATTCAAG AGGTTTCTTT TGACTTGGAG
CGTAATGGTT ACATTATTGG TCAAGTTGAT GCTGCGTTAT CGCGTTTGGA ACGTGCGGTA
GTAGATAAGT GCACTGAGCA AGAATTGGCG CAATGCGGAC GAGTTGCATG GAAAGCTCGT
GTAGAAGCGC TTTATCGTAA ACTTTTGCAA CATGCTCAAA GAGATTATCG CGATCGTTTT
GATCGTGGTT CTTCGCATCA CCCGTCTTAT GCGCGTAAAC AAGTGGATAT TATGGTCGAT
CAAGCATTAG ATAAGATTGC TCTTATGCTT GGTCATGAGC TTGAGTGGGA AACGGACAAA
GAAACATTAC AAGATATTGA TTCTGCTTAT GTTTCTAATG TGATTTTTAC GCAAAAAAAC
GGTAAGCACG GTTATGATGA GCGTCAAGTT GATTATTATT TAAACGCTTG TGTGCGTTTG
CTTAGCAGCT TGGAATCTTT TGAGCGTGTA GAACAGTATG TTGATGCGGA TAATAGTAGT
TCCTCATACT CTCGAGCAGC ATCTGAATCT TATTCTGCTC CTGCTTCTGT TCCTGCTTCT
GTTCCTCCTT CTGTTATTCC TGTAACTAAA GCTGAAGAGC CTGCTAAATC TTCAGAATCT
ACGGAATCTT ATAACCATTC TGAAGAGCCT GTTCCATCAT TTGCTCCTTC AATAAAGCCT
GCATCTGATT TCAGTGCTGC TTCTGCAGCT TCTTCCGCTT CTGCCACTGC ACCTTCTGCT
TCTTCAATAT TCAAACCTGT TGAGGATGCT GTGGATGATG AAGACACTGC GGATAGATTG
TCTAAGATTG CACCTCGCTC AATACCTAGC GTGCCAAATC ATGATAAACA AAGCATTTTT
GCTCCTGTAG ATTATGCTAA TCAAGATTCT AATGATTCGT TTGAAGCGTT AAATAAGTCT
GAGCGCGCAA TATTTACACC TCATGCTGCT GCAAGTAAGC CTTCTAATGT TCTTAACGAT
ACTGATAGCA ATGACGAGCT TTTGCAAAGC GCTACAGTAA TGCGAAACTC TTCTGAATCT
TCTGTGCTAC CTCCTTCTTT CACTCCTGCA GCTCGTAATC GCAATAATTC ATCTGCGCCT
AAGCCTGTTG CGGCTCCTGC TCCTGATGAA TCAATTCCAT CATTTGCTCC TCAAGATTCT
GCACAGCATT CCTCGCAGCA TTCTTCGCTT AATATTCCGG AGTTGCATGT TTCTAATTTG
CAGCCGAGTA AGCCATTGAG TTTAGATATT CCAGATTTGT CATTCCCAAT TATTGGTCAT
ATTGATGAAT CTACTAATTT CGGTAGCTCT TCTCAAGGCG ACGACGATTC GGAAAATAAC
GATCGTAATT AA
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| Protein sequence | MAQKPDTARN ASAMERVGKR KLGYNVAQVN AFLERAHTLY ESDEARLTQK DIQEVSFDLE
RNGYIIGQVD AALSRLERAV VDKCTEQELA QCGRVAWKAR VEALYRKLLQ HAQRDYRDRF
DRGSSHHPSY ARKQVDIMVD QALDKIALML GHELEWETDK ETLQDIDSAY VSNVIFTQKN
GKHGYDERQV DYYLNACVRL LSSLESFERV EQYVDADNSS SSYSRAASES YSAPASVPAS
VPPSVIPVTK AEEPAKSSES TESYNHSEEP VPSFAPSIKP ASDFSAASAA SSASATAPSA
SSIFKPVEDA VDDEDTADRL SKIAPRSIPS VPNHDKQSIF APVDYANQDS NDSFEALNKS
ERAIFTPHAA ASKPSNVLND TDSNDELLQS ATVMRNSSES SVLPPSFTPA ARNRNNSSAP
KPVAAPAPDE SIPSFAPQDS AQHSSQHSSL NIPELHVSNL QPSKPLSLDI PDLSFPIIGH
IDESTNFGSS SQGDDDSENN DRN
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