| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0434 |
|---|
| Symbol | |
|---|
| ID | 8709508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | - |
|---|
| Start bp | 476500 |
|---|
| End bp | 476763 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 646482549 |
|---|
| Product | putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein |
|---|
| Protein accession | YP_003373679 |
|---|
| Protein GI | 283782925 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000128603 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGCA CTACAACGAA TAAGGAAATA AGTGACAAAG AACTCGATAA AAAATTCGAT
AACGGTGAAG ACGTACTTGA GTACTTTGAT TTGGAACATC CAACTATAGA GCATAACTCA
AATGTGCAAA AACGCGTAAC ATTTACTATG CCAGAATGGA TTATTGAAAA ACTTGATAAA
CGTGCAAAAA TTCTTGCTAT TAGCAGAAAC GCAGTCGTCA ATACACTCAT TGCAGAAAAA
CTAGAAAGTT CGAAGCAAAA CTAG
|
|---|
| Protein sequence | MKSTTTNKEI SDKELDKKFD NGEDVLEYFD LEHPTIEHNS NVQKRVTFTM PEWIIEKLDK
RAKILAISRN AVVNTLIAEK LESSKQN
|
|---|
| |