| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0433 |
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| Symbol | ileS |
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| ID | 8709307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 473014 |
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| End bp | 476424 |
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| Gene Length | 3411 bp |
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| Protein Length | 1136 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646482548 |
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| Product | isoleucine--tRNA ligase |
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| Protein accession | YP_003373678 |
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| Protein GI | 283782924 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000095856 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCGAAT CCACTAATCC AGCAGCAAAC GCGTCCGAAA ATACGTCCGC AAATCACGTA
TACCCAAAGG TAAGTGTTTC AGCATCAACG CAAGAAAACT CCGGCGCGCA AGTTGCACCA
AATCCTTCCT TCCCAAAGCT TGAAGAATCA GTTCTCCAAT ACTGGGATGC AAACAACACT
TTCCGCAAGT CAATCGAATA CCGCCCGTCC GGCAAGGGTA GCCAAAACGA GTTCGTGTTC
TTCGACGGCC CTCCATTCGC AAACGGTCTT CCTCACTACG GCCACCTGCT CACAGGCTAC
GCAAAAGACG TCGTTCCGCG CTATCAGACT ATGCGCGGTC GCAAAGTAAA CCGCGTTTTT
GGTTGGGATA CTCACGGTCT TCCTGCAGAG TTGGAAGCGC AGAAGGAACT CGGCATTGAA
TCGGTTGAAC AAATCGAAAA AATGGGCATC GCAAAGTTCA ACGATGCTTG CCGTGCCAGC
GTTTTGAAGT ACACGAACGA GTGGCAAAAC TACGTGCATC GTCAGGCTCG CTGGGTTGAT
TTCGAGCGCG GTTACAAAAC GCTGAACATT CCATACATGG AATCCGTTAT GTGGGCATTT
AAGCAGCTTT ACGATAAGGG CTTGGCTTAC AAGGGTTACC GCGTGCTTCC GTACTGCCCG
AAGGACCAAA CTCCACTTTC AGCCCACGAG CTTCGCATGG ACGCGGATGT GTACCAGAAT
CGTCAGGATA CTACCGTTTC CGTTGCCGTT AAGCTTCGCG ACGAAGCCGA CGCTTACGCA
GTATTCTGGA CCACTACTCC TTGGACTGTG CCAACCAATT TCGCAATCGT AGTTGGCGCA
GACATCGACT ACGTGGAAGT TCGCCCAACT GAAGGCAAGT TCGCAGGTAA AAAGTTCTAC
ATCGGTAAGC CTTTGCTTGG CTCCTACACT AAGGAACTTG GCGAAAATTA CGAAGTTGTG
CGCGAACTTA AGGGCGCTGA GATGGCTGGT TGGCGCTACT ACCCAGTGTT CCCATACTTT
GCAAGCGATT CCGCGCTTTC CGAGGGTGGC ACTCCTGGTC CTAACGCTTT TACGATTTTC
ACTGCAGATT ATGTTGACAC CGCTGAAGGT ACTGGTCTCG TTCACCAGGC TCCTTACGGC
GAGGACGATA TGAACACGCT TAACGCGCAC GAAATTCGCA GCGTTGACGT GCTCGACGCA
GGCTGCAAGT TTACAAGCGA CTGCCCAGAT TACGAAGGCT TGTACGTTTT CGACGCGAAC
TTGCCAATTT TGCGTAACTT GCGTGCAGGA GACGGTCCGC TTGCTCAAAT GCCGGAAGAT
CAGCGCGCGT TGCTATTCCA AGAAAAAAGC TACGTGCACA GCTATCCTCA TTGCTGGCGT
TGTGCAACTC CGCTTATTTA TAAGCCTGTT TCTAGCTGGT TTGTGTCTGT TACGAAGATT
AAGAAGCGCT TGCTTGAGCT TAATCAGGAG ATTAATTGGA TTCCTGGAAA CGTTAAGGAC
GGTCAGTTTG GTAAGTGGCT TTCTAACGCG CGCGACTGGT CGATTAGCCG TAACCGCTTC
TGGGGTTCGC CAATTCCAGT GTGGGTGAGT GACGATCCAA AGTATCCTCG CGTAGACGTG
TACGGTTCTT TGGAAGAGCT TAAGGCTGAT TTTGGCGACT ATCCGCGCGA TGACGACGGC
AATGTGAATA TGCACCGCCC GTATATTGAT CGCCTTACTC GTCCAAATCC AGACGATCCT
ACTGGAAAGT CGCAAATGCA TCGTATTACG GATGTTCTCG ACTGCTGGTT TGAGTCTGGT
TCCATGCCTT TCGCGCAGTT CCATTATCCG TTTGAAAATA AGGAATTCTT CGAAGAGCAC
TTCCCATGCG ACTACATCGT TGAATATATT GGTCAGACTC GTGGCTGGTT CTACACGCTT
CACATTATGG CTACGGCTCT ATTCGACCGC CCAGCTTATA AGAACGTGAT TTGCCACGGC
ATCGTGCTTG GTTCCGACGG CCAGAAGATG AGTAAGCATT TGCGCAATTA CCCGGATGTG
AACGGCGTTT TCAACGAGTA CGGCTCGGAC GCAATGCGCT GGTTCCTCAT GTCTTCGCCA
ATTTTGCGCG GTGGCAATTT GATTGTGACT GCAGACGGCA TTAGGGATAC GGTTCGTCAG
GTTATGCTTC CAGTTTGGAG CTCGTACTAC TTCTTCACTT TGTATGCGAA TGCTGCAAAC
GGTGGTAAGG GTTATGACGC TCGTCGCCTT CGCGCGGATG AGGTTGCAGG ACTTTGCAAC
ATGGATCGTT ATTTGCTTGC TCGCACGCGT TTGCTTGTTG AGCGCGTAGA AAAGTGCTTG
AACGCGTTTG CGATTAGCGA TGCTTGCGCA GCAGTTGGCG ATTTTATTGA CGTGCTTACG
AATTGGTATA TTCGCGGCAG TCGTGACCGC TTCTGGAATG AAGACGAGAC TGCTTTCAAC
ACGCTTTACA CTGTGTTGGA AGTGTTCATG CGCACGATTG CTCCTCTTGC TCCTATGGAA
GCTGAGGCTG TTTGGCGCGG TCTTACCGGT GGCGAATCCG TGCATTTGGC TGATTGGCCT
TATTTGGTGG AGCCTGAAAC TCTTTCAGAC GGTGAGAAGA ACCCTAAGGC TGGAACAGTC
ACTGAGCTTG GTGCTGTTCT TGCTCATGAC GATGCTTTGG TTGCTGCTAT GGATAAGGTT
CGCGAGGTTG TGTCTTCTGC GCTTTCGTTG CGTAAGGCGG AACAGTTGCG CGTACGCCAG
CCATTGGCAA ACTTGACGGT TGTTGCAGAA AATACTGCTG CTGTTGAGCC TTACGAGCAG
GTTCTTGAGC GCGAGCTTAA CGTGAAGAAT GTTACATTCT GCACTTTGGA AGACGCAAGC
AACCACGGTT TGAAGATTGT TCACGAGCTT AAGGTGAATG CGCGCGCGGC TGGTCCTCGT
TTGGGCAAGC AAGTGCAGTT TGCTATTAAG TCTTCTAAGA GTGGCGATTG GCGAGTTGAC
GAGTCTGGCG CTCCTGTTGT TCAGACTCCA AACGGCGAAG TTGCGCTTGT TGAGGGCGAA
TATGAGCTTG TAAATCGCGT TGAGTCTTCG GATGCTCAAG CGGCTGCGAA TACTGCTTCT
GCTGCAATGC CAACTGGCGG TTTCGTTATG CTCGACACTG CTTTGACTAG CGATTTGCTT
GCTGAAGGTT ACGCTCGCGA CGCTATTCGC GCTGTTCAGG ATGCCCGTAA GGAGAACGGT
TTGGATATTA GTGACCGAAT CGCTTTGACT TTGAGCGTGC CAGCTTCGGA CGTTGTTAAA
GTTGAGCAGT TCCGCGATTT GATTGCGGAG GAGACTTTGG CTACGAGCTT CGAGGTTGTT
GAGGCTGATT CTAGCGCAAC TGAGCTTAGC GTAACTCTTA AGCGTGCGTA G
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| Protein sequence | MSESTNPAAN ASENTSANHV YPKVSVSAST QENSGAQVAP NPSFPKLEES VLQYWDANNT
FRKSIEYRPS GKGSQNEFVF FDGPPFANGL PHYGHLLTGY AKDVVPRYQT MRGRKVNRVF
GWDTHGLPAE LEAQKELGIE SVEQIEKMGI AKFNDACRAS VLKYTNEWQN YVHRQARWVD
FERGYKTLNI PYMESVMWAF KQLYDKGLAY KGYRVLPYCP KDQTPLSAHE LRMDADVYQN
RQDTTVSVAV KLRDEADAYA VFWTTTPWTV PTNFAIVVGA DIDYVEVRPT EGKFAGKKFY
IGKPLLGSYT KELGENYEVV RELKGAEMAG WRYYPVFPYF ASDSALSEGG TPGPNAFTIF
TADYVDTAEG TGLVHQAPYG EDDMNTLNAH EIRSVDVLDA GCKFTSDCPD YEGLYVFDAN
LPILRNLRAG DGPLAQMPED QRALLFQEKS YVHSYPHCWR CATPLIYKPV SSWFVSVTKI
KKRLLELNQE INWIPGNVKD GQFGKWLSNA RDWSISRNRF WGSPIPVWVS DDPKYPRVDV
YGSLEELKAD FGDYPRDDDG NVNMHRPYID RLTRPNPDDP TGKSQMHRIT DVLDCWFESG
SMPFAQFHYP FENKEFFEEH FPCDYIVEYI GQTRGWFYTL HIMATALFDR PAYKNVICHG
IVLGSDGQKM SKHLRNYPDV NGVFNEYGSD AMRWFLMSSP ILRGGNLIVT ADGIRDTVRQ
VMLPVWSSYY FFTLYANAAN GGKGYDARRL RADEVAGLCN MDRYLLARTR LLVERVEKCL
NAFAISDACA AVGDFIDVLT NWYIRGSRDR FWNEDETAFN TLYTVLEVFM RTIAPLAPME
AEAVWRGLTG GESVHLADWP YLVEPETLSD GEKNPKAGTV TELGAVLAHD DALVAAMDKV
REVVSSALSL RKAEQLRVRQ PLANLTVVAE NTAAVEPYEQ VLERELNVKN VTFCTLEDAS
NHGLKIVHEL KVNARAAGPR LGKQVQFAIK SSKSGDWRVD ESGAPVVQTP NGEVALVEGE
YELVNRVESS DAQAAANTAS AAMPTGGFVM LDTALTSDLL AEGYARDAIR AVQDARKENG
LDISDRIALT LSVPASDVVK VEQFRDLIAE ETLATSFEVV EADSSATELS VTLKRA
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