| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0416 |
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| Symbol | |
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| ID | 8710044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 444149 |
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| End bp | 445162 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 646482531 |
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| Product | Abi-like protein |
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| Protein accession | YP_003373663 |
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| Protein GI | 283782909 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.35712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATC AATGCGATTC GGATATAAAG AAAACATGTG CAATTAGTAA ATTGCCTGTA
AAGCTTTCGT CAATAGATCA GATAAAACAT CTTAAGAAGC AAGGTATAAC TTTTAACAAA
CAATCTAAAG ATTCTGCAAT TTCCTACCTT TCAATCTTCT CATATTATTT TGAGACTTGT
TCATATAAAA AATTGTTTAG CAAGAGAGTT GGTGGATCTA GGGATGGCCA GTATATTGAC
TTGGATTTTG ATCAATTATG CAAAATAGAG CAGCTTAATA GGATGTTTCA AATACTTTTG
CTTCTAATAA CTTTAGCTAT AGAGCATGAG GCAAAAGTTA AGTTAATGAA AATGTTTACT
GAAAATCCTG AAGAAGATGG ATACTCCATT GTTGAAGATT ACATGTCTAG TCTTTATAAC
GATGACCGCA AAATACTAAT TGCTGAATTA GAACGACTTA AAGATGGGAA ATATAGCAGA
GAATCGGCGG CAAAGTATAC AGGTGGAATG CCAATTTGGG TATTTGTTGA AGGTATTACA
TTTGGAACAT TGTTAAGATT TTATCGTTTT TGCGCAAAAA GATGGGGTAG TAGAGAGATG
CAGAAGGAGC ATCACTTATT GTGCAGGGTA AAATCCGTGC GTAATGCTTG TGCTCATTCT
AATTCAATAT TGGATGGAAT TACTGAAAAG AGTTTTGACA ACGTGCTTTT GCTTGAAGAA
GTAAGTAAAG CTATTGAAGC TGTAGGGTTC AATAAGCGTG CGAGGCGATC GAATATGTGT
AATGCGAAGA TGAAAGAAAT AGTGATAACT GCATATATGT ATAAGAGATT TTTGTCTAGG
AATTATCAAT GTGATGAATG CGTGAATGAT CAAAAAAGCA TTATTAGATA CATTGCAGGA
GGATTTATAA AAAAGGCATC TGAGTACACA AAAGAGTATG ATAAAGCGAG TAAATTTAAC
TCATTGCTTG CTTTTATTTG TACTGTTATT GACAGTTGGA TATGTGAAAG ATAG
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| Protein sequence | MDNQCDSDIK KTCAISKLPV KLSSIDQIKH LKKQGITFNK QSKDSAISYL SIFSYYFETC
SYKKLFSKRV GGSRDGQYID LDFDQLCKIE QLNRMFQILL LLITLAIEHE AKVKLMKMFT
ENPEEDGYSI VEDYMSSLYN DDRKILIAEL ERLKDGKYSR ESAAKYTGGM PIWVFVEGIT
FGTLLRFYRF CAKRWGSREM QKEHHLLCRV KSVRNACAHS NSILDGITEK SFDNVLLLEE
VSKAIEAVGF NKRARRSNMC NAKMKEIVIT AYMYKRFLSR NYQCDECVND QKSIIRYIAG
GFIKKASEYT KEYDKASKFN SLLAFICTVI DSWICER
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