| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0414 |
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| Symbol | |
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| ID | 8709800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 440543 |
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| End bp | 443230 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646482528 |
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| Product | cobalt transport protein |
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| Protein accession | YP_003373661 |
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| Protein GI | 283782907 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.624811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATG CTACTCAATC GCAAGAATCT GAAACTTTCC TTCCAACAGA TTTAAGTGAT
CGCAAGAGTA TCAGCAACGC TAGTGACGCA AGTAGAGCTA GTGATAACGC TTCTAACGCA
AGTAACGCTG AACTTCGTTT TGAGAATTGG GGTTATCGTC ATGCTTCCCG TCGCGCTTTT
GCTGTGCGCG GGTTGGACCT CACGATTAAG GCGGGGCAGC GCGTGTTGCT GCTTGGTGCA
TCAGGCATCG GTAAATCCAC GATTTTAAGC GGCGCGGCAG GTCTTATTGG CAATGATTTT
GTGGCGAAAA ATAGCGCAAA ATCCCAGCAA ACCACTCTCG TCGAAGATGC CGATGGTGGT
GTGAGCGAGG GTTGTGTTTT GGTTGACGGC GTGCCGGTTC GACGTGCGCG CGGTCGCGTT
GGTTTGGTTT TGCAAGATCC GGATGCACAG GCGATTTTCC AGCGTTTGGG GGATAACGTT
GCGTTTGGTC CGGAAAATAT GAACGTTCCG CGCAACGAAA TTTGGGATCG CGTGCGCAAA
AGTCTTAAAG AAGTTGGGTT GGATGGCTTG CAATTGCATC GCTCAACTTC GCATTTAAGC
GGCGGTCAGA TGCAGCGTTT GGCGCTTGCT GGCGCGCTCG CTATGCAGCC GAGTGTGCTG
CTTTTGGACG AGCCGACTGC GAATTTGGAT CCGGATGGCA CGCAGCAGAT TGTTGGTGCT
GTGCGCGCGG TTTTGGATTT GACGCACGCC ACGATGGTGC TTGTGGAGCA TCACGCGGAG
CCGTGGATTG ACATGATTGA CCGCGTGGTT GTGCTTGGGC TTGAGAATGA TGAAGCTGCG
AACGGAAAAG CTGCGAACAA CGAAACCGTT CACGATGACG ATATTGCGCG CGTGGCTTCT
TCGCGCACAG TGATTGTGGC GGACGGCACG CCAGACGAGG TGTTTAATCG CACCGATTTG
GACTTTGAGG ATCTGGGTAT TTGGCTTCCG GAACGCTACA AGAAAAACGT AAAATCTTCT
GCAAATGAAT CTTCCGTAAG TAATTCTTCC GCAAATGCAG AATCTTCTGA AAAATATTAC
GAAAACTGCG ATCCAGCAGA AGGCTACGGA GAAGTGCTAC TTTTCACGAA GGACCTCGCA
ATCAGCCATA ATAGCGAGCC GATTGCGCGT CACATCAATC TTGAGTTTAA AGCCGGACAG
ATTACGGCTT TGGTCGGCGC GAACGGTGCT GGAAAATCAA CGCTTTCGCT CACTTTGGCT
GGTCTTTTGC CGGCAGTAAG CGGCGAGGTT GTGGCGAGTG ATGCTCTTGC TCAAGGCGCG
AATGGTACGG ATCCAATGAA GTGGAAGTCG CCTGATTTGG CGAAGCGCAT TTCGTACGTT
TTTCAGAATC CGGAGCATCA GTTTGCGTGT GGTTCGGTGT TGGATGAGGT TATGTTGGGG
CCGCTTCGCA CGGGTGTTTC GGCGGATGAG GCGCGCGCGA AGGCTCAGGA GTTGCTGAAG
CGATTCCGTC TGGCTCGTTA CGCGAAGGCG AATCCGTACA CGCTTTCGGG AGGTGAAAAG
CGTCGTCTGA CTGTGGCGGC GTCGCTTGCT GCGGCTCCGC GTGTGCTGAT TTTGGACGAG
CCGACTTTTG GGCAGGATCG CAAAACTTGG TTGCAAATTA TTCGCTTGAT TGCAAGCCTT
CGTAGCGAGG GTGTGAGCAT TATTGTGGTG ACGCACGACC GTGAGCTGGT TGAGGCGTTG
GGTGCGCGCT TGGTTGAGCT TGTGCCGGAT GCGAAAGCTG AAGCTGCTGA AATGAGTGCT
GCTGAAGTGA GTGCTTCCGA AGTGAAATCT TCCGAAGCGC TTTCCGCAAC TACCGGCGCA
ACAGACATTT CGCGTATCAA AGTGAGCGCT GTAAACAATC GCGACGAGGA AGCGAAACTT
TCAAGCAAAT CGCCGCTTCT CGCGTCAATT AATCCAGTAT TTCGCATTTT TGGAGCGTTC
GCGGCTTCGA TTCCGCTATT TTTTACGCTT GATTGCGTTT CTGCTTCGGT CGCGTTGCTG
TTGGAATTTG TGATTTTTGC GTGCATTAAG CTTCCGCCAT GGCGTGTGAT TCGCCTTTCG
TGGCCTGTGT GGGTGGGTGC GCCGACTTCC GCGCTCACTG TGTTGCTATA CGGCAAAAGT
GGCGGAAATA CTTGGTTCCA GTGGTGGCTG ATGCATGCTA CGGATCGTTC GGCTATGTTG
GCTGTTGCAA CTTCGCTTAG GATTTTGGCG ATTGGCGTGC CGTCGATTGT GATGGTGATT
GGGCTTGATG CTACGGATTT GGCTGATGCT TTCAGCCAGG TGCTGCATTT GCCGGATCGA
TTCGTGTACG GCGGTTTGGC TGGAATTAGG CTGTTTGGCG TGCTGCAGGA TGATTGGGCG
GCGCTGACTG CGTCGAGGCG TTCGCGCGGT TTGGGTGATG AGCATCGTGT GAGGGCGTTC
TTCCCGCAGT CGTTTGCGCT GCTTGTGCTT TCGATTCGAC GCTCGACGAC GCTCGCCACG
GCTATGGAAG CGCGCGGTTT TGGGGGAATT GGTGCGCGTT CGCACGCTCG CGTGAGTCGT
GTGCGTGCGC GCGACTGGTG GATTTTTGCT GTGTGCGCGA TTGTGCCGTC GGTTGCTGTT
GTGACTGCGC TTTACTTCGG CACCTTCGCC TTCCTTGGCG GCGCGTGA
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| Protein sequence | MPDATQSQES ETFLPTDLSD RKSISNASDA SRASDNASNA SNAELRFENW GYRHASRRAF
AVRGLDLTIK AGQRVLLLGA SGIGKSTILS GAAGLIGNDF VAKNSAKSQQ TTLVEDADGG
VSEGCVLVDG VPVRRARGRV GLVLQDPDAQ AIFQRLGDNV AFGPENMNVP RNEIWDRVRK
SLKEVGLDGL QLHRSTSHLS GGQMQRLALA GALAMQPSVL LLDEPTANLD PDGTQQIVGA
VRAVLDLTHA TMVLVEHHAE PWIDMIDRVV VLGLENDEAA NGKAANNETV HDDDIARVAS
SRTVIVADGT PDEVFNRTDL DFEDLGIWLP ERYKKNVKSS ANESSVSNSS ANAESSEKYY
ENCDPAEGYG EVLLFTKDLA ISHNSEPIAR HINLEFKAGQ ITALVGANGA GKSTLSLTLA
GLLPAVSGEV VASDALAQGA NGTDPMKWKS PDLAKRISYV FQNPEHQFAC GSVLDEVMLG
PLRTGVSADE ARAKAQELLK RFRLARYAKA NPYTLSGGEK RRLTVAASLA AAPRVLILDE
PTFGQDRKTW LQIIRLIASL RSEGVSIIVV THDRELVEAL GARLVELVPD AKAEAAEMSA
AEVSASEVKS SEALSATTGA TDISRIKVSA VNNRDEEAKL SSKSPLLASI NPVFRIFGAF
AASIPLFFTL DCVSASVALL LEFVIFACIK LPPWRVIRLS WPVWVGAPTS ALTVLLYGKS
GGNTWFQWWL MHATDRSAML AVATSLRILA IGVPSIVMVI GLDATDLADA FSQVLHLPDR
FVYGGLAGIR LFGVLQDDWA ALTASRRSRG LGDEHRVRAF FPQSFALLVL SIRRSTTLAT
AMEARGFGGI GARSHARVSR VRARDWWIFA VCAIVPSVAV VTALYFGTFA FLGGA
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