| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0395 |
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| Symbol | phoU |
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| ID | 8709583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 425317 |
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| End bp | 425997 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482511 |
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| Product | phosphate transport system regulatory protein PhoU |
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| Protein accession | YP_003373644 |
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| Protein GI | 283782890 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0704] Phosphate uptake regulator |
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| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTAA TTTTCAACGA AGAAATGAAG GCGATTGCTT CAAACATCGA ACGCATGGCA
GAACTTGTAG CAAAAGCTAT GAACGATGCT GGAAGCGCGC TTTTAAACGC GGATTTGGAA
GCTGCTCAAA CTGTTATCGA TAAAGACGCA GACTTAGACG CTTTAGAAGC AAACACTATT
GACCAATGCT TGACTTTGCT TGCTCGTCAA AACCCTGTGG CAACGGACTT GCGCGAAGTT
GTAGCTACAA TGCGATTAGC TGCAACGTTT GAACGCATGG GCGATTTAAC AAGTCATATC
GCTCAAATTA CTAGACGAAC CTGGCCTGAA TCTGCTATTG CACAAGAAGG ACGCGAAACT
ATTGTTGCAA TGGTTGATTT CTTGCGCGAA CTGTCAGGTC ACTTAACGAC CATGGTTGCA
AATCGCGACG TGCAAATTGC GGAAACTATT ATTGCTGGCG ACGATGCACT CGACAAATTG
CACGAGAAGA TTTTTGAGCT GGTAGAAGGC GAAAATTGGA AGGGTACACG CAGGCAGTTA
ATTGATGTCG TTCTGCTTAG CCGCTTTATT GAGCGAATTG GAGACCATTG CGTTGCTGTC
GCAAGGCAAA TTGTGTTTAT TGTTTCCGGA TTCGATCCGT CCAAGAAACC AGAGCCAGAT
AAAGACACTG TTGTAGCGTA A
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| Protein sequence | MRVIFNEEMK AIASNIERMA ELVAKAMNDA GSALLNADLE AAQTVIDKDA DLDALEANTI
DQCLTLLARQ NPVATDLREV VATMRLAATF ERMGDLTSHI AQITRRTWPE SAIAQEGRET
IVAMVDFLRE LSGHLTTMVA NRDVQIAETI IAGDDALDKL HEKIFELVEG ENWKGTRRQL
IDVVLLSRFI ERIGDHCVAV ARQIVFIVSG FDPSKKPEPD KDTVVA
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